Difference between revisions of "TSS:Hg 102212.1"
From referenceTSS
| Line 3: | Line 3: | ||
|CD30LG= | |CD30LG= | ||
|TNLG3A= | |TNLG3A= | ||
| + | |all_trans=LF355055:0 MA590632:0 LF355056:-63 MA590633:-63 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-93443 | |distance_to_tss=-93443 | ||
|end=115024047 | |end=115024047 | ||
| Line 11: | Line 12: | ||
|entrez_id=944 | |entrez_id=944 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=CD153 | + | |gene_alias=CD153{{!}}CD30L{{!}}CD30LG{{!}}TNLG3A |
| − | |gene_description= | + | |gene_description=TNF superfamily member 8 |
|gene_name=TNFSF8 | |gene_name=TNFSF8 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 19: | Line 20: | ||
|nearest_refseq=NM_001244 | |nearest_refseq=NM_001244 | ||
|nearest_unigene=Hs.494901 | |nearest_unigene=Hs.494901 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=115024029 | |start=115024029 | ||
|start_of_center_position=115024038 | |start_of_center_position=115024038 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF355055 MA590632 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102212.1 | |tss_id=hg_102212.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:58, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115024038 |
|---|---|
| End of the center position in the TSS region: | 115024039 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF355055 MA590632 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | LF355055:0 MA590632:0 LF355056:-63 MA590633:-63 |
TATA-Box annotation
| Distance to TSS: | -93443 |
|---|---|
| Nearest PromoterID: | NM_001252290 |
| Entrez ID: | 944 |
| Nearest Unigene: | Hs.494901 |
| Nearest Refseq: | NM_001244 |
| Nearest Ensembl: | ENSG00000106952 |
| Gene Name: | TNFSF8 |
| Gene Alias: | CD153|CD30L|CD30LG|TNLG3A |
| Gene Description: | TNF superfamily member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
