Difference between revisions of "TSS:Hg 219902.1"
From referenceTSS
| Line 6: | Line 6: | ||
|ST6GALNACIV= | |ST6GALNACIV= | ||
|ST6GalNAc= | |ST6GalNAc= | ||
| − | |all_trans=BC036705:0 AJ271734:-59 ENST00000361444.3 | + | |all_trans=BC036705:0 AJ271734:-59 ENST00000361444.3:-64 AK292049:-85 ENST00000467674.5:-86 AK000600:-90 NM_175040:-94 ENST00000479747.1:-106 ENST00000335791.10:-109 NM_175039:-109 AF127142:464 AB035172:492 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 15: | Line 15: | ||
|entrez_id=27090 | |entrez_id=27090 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=IV | + | |gene_alias=IV{{!}}SIAT3-C{{!}}SIAT3C{{!}}SIAT7-D{{!}}SIAT7D{{!}}ST6GALNACIV{{!}}ST6GalNAc |
| − | |gene_description= | + | |gene_description=ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 |
|gene_id=27090 | |gene_id=27090 | ||
| − | |gene_name= | + | |gene_name=ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 |
|gene_source=HGNC:17846 | |gene_source=HGNC:17846 | ||
|gene_symbol=ST6GALNAC4 | |gene_symbol=ST6GALNAC4 | ||
| Line 25: | Line 25: | ||
|hgnc_mgi_id=HGNC:17846 | |hgnc_mgi_id=HGNC:17846 | ||
|nearest_ensembl=ENSG00000136840 | |nearest_ensembl=ENSG00000136840 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_175040 |
|nearest_refseq=NM_014403 | |nearest_refseq=NM_014403 | ||
|nearest_unigene=Hs.3972 | |nearest_unigene=Hs.3972 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=127916931 | |start=127916931 | ||
Revision as of 08:19, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 127916931 |
|---|---|
| End of the center position in the TSS region: | 127916932 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC036705 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | BC036705:0 AJ271734:-59 ENST00000361444.3:-64 AK292049:-85 ENST00000467674.5:-86 AK000600:-90 NM_175040:-94 ENST00000479747.1:-106 ENST00000335791.10:-109 NM_175039:-109 AF127142:464 AB035172:492 |
TATA-Box annotation
| Distance to TSS: | 94 |
|---|---|
| Nearest PromoterID: | NM_175040 |
| Entrez ID: | 27090 |
| Nearest Unigene: | Hs.3972 |
| Nearest Refseq: | NM_014403 |
| Nearest Ensembl: | ENSG00000136840 |
| Gene Name: | ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 |
| Gene Alias: | IV|SIAT3-C|SIAT3C|SIAT7-D|SIAT7D|ST6GALNACIV|ST6GalNAc |
| Gene Description: | ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
