Difference between revisions of "TSS:Hg 7244.1"
From referenceTSS
| Line 3: | Line 3: | ||
|MSTP070= | |MSTP070= | ||
|TRM1L= | |TRM1L= | ||
| − | |all_trans=ENST00000367501.7 | + | |all_trans=ENST00000367501.7:0 NM_001105518:-16 AK127980:38 BC030781:75 ENST00000367500.9:83 NM_017673:83 AK315802:109 AK291443:209 ENST00000450350.1:398 |
|bG120K12.3= | |bG120K12.3= | ||
|chr=chr1 | |chr=chr1 | ||
| Line 13: | Line 13: | ||
|entrez_id=81627 | |entrez_id=81627 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=C1orf25 | + | |gene_alias=C1orf25{{!}}MST070{{!}}MSTP070{{!}}TRM1L{{!}}bG120K12.3 |
|gene_description=tRNA methyltransferase 1 like | |gene_description=tRNA methyltransferase 1 like | ||
|gene_id=54823 | |gene_id=54823 | ||
| − | |gene_name= | + | |gene_name=SWT1 RNA endoribonuclease homolog |
|gene_source=HGNC:16785 | |gene_source=HGNC:16785 | ||
|gene_symbol=SWT1 | |gene_symbol=SWT1 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_030934 | |nearest_refseq=NM_030934 | ||
|nearest_unigene=Hs.107149 | |nearest_unigene=Hs.107149 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=185157075 | |start=185157075 | ||
|start_of_center_position=185157079 | |start_of_center_position=185157079 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000367501.7 | + | |transcript_name=ENST00000367501.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_7244.1 | |tss_id=hg_7244.1 | ||
Revision as of 11:35, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 185157079 |
|---|---|
| End of the center position in the TSS region: | 185157080 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000367501.7 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000367501.7:0 NM_001105518:-16 AK127980:38 BC030781:75 ENST00000367500.9:83 NM_017673:83 AK315802:109 AK291443:209 ENST00000450350.1:398 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001202423 |
| Entrez ID: | 81627 |
| Nearest Unigene: | Hs.107149 |
| Nearest Refseq: | NM_030934 |
| Nearest Ensembl: | ENSG00000121486 |
| Gene Name: | SWT1 RNA endoribonuclease homolog |
| Gene Alias: | C1orf25|MST070|MSTP070|TRM1L|bG120K12.3 |
| Gene Description: | tRNA methyltransferase 1 like |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
