Difference between revisions of "TSS:Hg 16305.1"
From referenceTSS
| Line 6: | Line 6: | ||
|NS1-BP= | |NS1-BP= | ||
|NS1BP= | |NS1BP= | ||
| − | |all_trans=DQ443528:-5 BC067739:-16 AJ012449:-30 AF161553:-32 AF205218:-41 ENST00000459929.5 | + | |all_trans=DQ443528:-5 BC067739:-16 ENST00000367498.8:-30 NM_006469:-30 AJ012449:-30 AF161553:-32 AF205218:-41 ENST00000459929.5:-60 AK023123:-60 AB020657:-123 AK292431:124 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
|distance=-5 | |distance=-5 | ||
| − | |distance_to_tss= | + | |distance_to_tss=35 |
|end=185317213 | |end=185317213 | ||
|end_of_center_position=185317208 | |end_of_center_position=185317208 | ||
|entrez_id=10625 | |entrez_id=10625 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=FLARA3 | + | |gene_alias=ARA3{{!}}FLARA3{{!}}HSPC068{{!}}KLHL39{{!}}ND1{{!}}NS-1{{!}}NS1-BP{{!}}NS1BP |
|gene_description=influenza virus NS1A binding protein | |gene_description=influenza virus NS1A binding protein | ||
|gene_id=10625 | |gene_id=10625 | ||
| Line 21: | Line 21: | ||
|gene_source=HGNC:16951 | |gene_source=HGNC:16951 | ||
|gene_symbol=IVNS1ABP | |gene_symbol=IVNS1ABP | ||
| − | |gene_synonyms=HSPC068 KIAA0850 KLHL39 ND1 NS-1 NS1-BP | + | |gene_synonyms=ARA3 HSPC068 KIAA0850 KLHL39 ND1 NS-1 NS1-BP |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:16951 | |hgnc_mgi_id=HGNC:16951 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_006469 | |nearest_refseq=NM_006469 | ||
|nearest_unigene=Hs.497183 | |nearest_unigene=Hs.497183 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=185317202 | |start=185317202 | ||
Revision as of 16:29, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 185317207 |
|---|---|
| End of the center position in the TSS region: | 185317208 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | DQ443528 |
|---|---|
| Distance: | -5 |
| Num_trans: | 11 |
| All_trans: | DQ443528:-5 BC067739:-16 ENST00000367498.8:-30 NM_006469:-30 AJ012449:-30 AF161553:-32 AF205218:-41 ENST00000459929.5:-60 AK023123:-60 AB020657:-123 AK292431:124 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_006469 |
| Entrez ID: | 10625 |
| Nearest Unigene: | Hs.497183 |
| Nearest Refseq: | NM_006469 |
| Nearest Ensembl: | ENSG00000116679 |
| Gene Name: | influenza virus NS1A binding protein |
| Gene Alias: | ARA3|FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP |
| Gene Description: | influenza virus NS1A binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
