Difference between revisions of "TSS:Hg 103047.1"
From referenceTSS
| Line 6: | Line 6: | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=-268 | |distance=-268 | ||
| − | |distance_to_tss= | + | |distance_to_tss=6957 |
|end=134032440 | |end=134032440 | ||
|end_of_center_position=134032438 | |end_of_center_position=134032438 | ||
|entrez_id=266655 | |entrez_id=266655 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=LP2477 | + | |gene_alias=LINC00094{{!}}LP2477{{!}}NCRNA00094 |
| − | |gene_description= | + | |gene_description=BRD3 opposite strand |
|gene_id=8019 | |gene_id=8019 | ||
|gene_name=bromodomain containing 3 | |gene_name=bromodomain containing 3 | ||
| Line 18: | Line 18: | ||
|gene_symbol=BRD3 | |gene_symbol=BRD3 | ||
|gene_synonyms=KIAA0043 ORFX RING3L | |gene_synonyms=KIAA0043 ORFX RING3L | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id=HGNC:1104 | |hgnc_mgi_id=HGNC:1104 | ||
|nearest_ensembl=ENSG00000235106 | |nearest_ensembl=ENSG00000235106 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001355256 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001355256 |
|nearest_unigene=Hs.654869 | |nearest_unigene=Hs.654869 | ||
|num_trans=2 | |num_trans=2 | ||
Revision as of 17:18, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 134032437 |
|---|---|
| End of the center position in the TSS region: | 134032438 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK123322 |
|---|---|
| Distance: | -268 |
| Num_trans: | 2 |
| All_trans: | AK123322:-268 AK026880:423 |
TATA-Box annotation
| Distance to TSS: | 6957 |
|---|---|
| Nearest PromoterID: | NM_001355256 |
| Entrez ID: | 266655 |
| Nearest Unigene: | Hs.654869 |
| Nearest Refseq: | NM_001355256 |
| Nearest Ensembl: | ENSG00000235106 |
| Gene Name: | bromodomain containing 3 |
| Gene Alias: | LINC00094|LP2477|NCRNA00094 |
| Gene Description: | BRD3 opposite strand |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
