Difference between revisions of "TSS:Mm 100678.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000077078.11:0 ENSMUST00000064364.2:0 AK052436:0 AK170680:20 ENSMUST00000144055.1:22 AK034108:31 AK053358:35 AK168904:47 AK149640:50 BC014812:69 AK077638:70 AK167455:87 | + | |all_trans=ENSMUST00000077078.11:0 ENSMUST00000064364.2:0 AK052436:0 AK170680:20 ENSMUST00000144055.1:22 AK034108:31 AK053358:35 AK168904:47 AK149640:50 BC014812:69 AK077638:70 AK167455:87 LF225621:266 MA461198:266 LF225620:380 MA461197:380 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_027820 | |nearest_refseq=NM_027820 | ||
|nearest_unigene=Mm.72795 | |nearest_unigene=Mm.72795 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=mouse | |species=mouse | ||
|start=3452355 | |start=3452355 | ||
Revision as of 16:22, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3452366 |
|---|---|
| End of the center position in the TSS region: | 3452367 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000077078.11 ENSMUST00000064364.2 AK052436 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENSMUST00000077078.11:0 ENSMUST00000064364.2:0 AK052436:0 AK170680:20 ENSMUST00000144055.1:22 AK034108:31 AK053358:35 AK168904:47 AK149640:50 BC014812:69 AK077638:70 AK167455:87 LF225621:266 MA461198:266 LF225620:380 MA461197:380 |
TATA-Box annotation
| Distance to TSS: | -70 |
|---|---|
| Nearest PromoterID: | NR_028317 |
| Entrez ID: | 71523 |
| Nearest Unigene: | Mm.72795 |
| Nearest Refseq: | NM_027820 |
| Nearest Ensembl: | ENSMUSG00000034587 |
| Gene Name: | ring finger protein 185 |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 8430429K09 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.08 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
