Difference between revisions of "TSS:Hg 23490.1"
From referenceTSS
Line 4: | Line 4: | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=21 | |distance=21 | ||
− | |distance_to_tss= | + | |distance_to_tss=62758 |
|end=167250131 | |end=167250131 | ||
|end_of_center_position=167250130 | |end_of_center_position=167250130 | ||
Line 27: | Line 27: | ||
|start_of_center_position=167250129 | |start_of_center_position=167250129 | ||
|strand=+ | |strand=+ | ||
− | |tata_box= | + | |tata_box=84(CCTTAAATATAG,+,0.00) |
|transcript_name=BC070143 | |transcript_name=BC070143 | ||
|tss_classification=yes | |tss_classification=yes |
Revision as of 13:21, 17 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 167250129 |
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End of the center position in the TSS region: | 167250130 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | BC070143 |
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Distance: | 21 |
Num_trans: | 4 |
All_trans: | BC070143:21 AK056582:-53 BC107799:105 AL832375:-363 |
TATA-Box annotation
Distance to TSS: | 62758 |
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Nearest PromoterID: | NM_001199145 |
Entrez ID: | 129446 |
Nearest Unigene: | Hs.73680 |
Nearest Refseq: | NM_152381 |
Nearest Ensembl: | ENSG00000163092 |
Gene Name: | xin actin binding repeat containing 2 |
Gene Alias: | CMYA3 |
Gene Description: | xin actin binding repeat containing 2 |
Gene Type: | protein-coding |
CpG%: | 0.01 |
GC%: | 0.373134 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 84(CCTTAAATATAG,+,0.00) |