Difference between revisions of "TSS:Mm 101217.1"
From referenceTSS
| Line 3: | Line 3: | ||
|Arp2= | |Arp2= | ||
|D6Ertd746e= | |D6Ertd746e= | ||
| − | |all_trans=ENSMUST00000000137.7:0 ENSMUST00000134779.1:0 BC027799:0 ENSMUST00000132022.1:10 AK032832:10 AK033014:10 AK088216:15 AK163217:15 NM_146243:-26 | + | |all_trans=ENSMUST00000000137.7:0 ENSMUST00000134779.1:0 BC027799:0 ENSMUST00000132022.1:10 AK032832:10 AK033014:10 AK088216:15 AK163217:15 NM_001362899:-26 NM_146243:-26 LF198393:-27 MA433970:-27 BC047530:27 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 12: | Line 12: | ||
|entrez_id=66713 | |entrez_id=66713 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=4921510D23Rik | + | |gene_alias=4921510D23Rik{{!}}AA409782{{!}}Arp2{{!}}D6Ertd746e |
|gene_description=ARP2 actin-related protein 2 | |gene_description=ARP2 actin-related protein 2 | ||
|gene_id=66713 | |gene_id=66713 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=MGI:1913963 | |hgnc_mgi_id=MGI:1913963 | ||
|nearest_ensembl=ENSMUSG00000020152 | |nearest_ensembl=ENSMUSG00000020152 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362899 |
|nearest_refseq=NM_146243 | |nearest_refseq=NM_146243 | ||
|nearest_unigene=Mm.259045 | |nearest_unigene=Mm.259045 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=mouse | |species=mouse | ||
|start=20112876 | |start=20112876 | ||
Revision as of 16:35, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 20112900 |
|---|---|
| End of the center position in the TSS region: | 20112901 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000000137.7 ENSMUST00000134779.1 BC027799 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENSMUST00000000137.7:0 ENSMUST00000134779.1:0 BC027799:0 ENSMUST00000132022.1:10 AK032832:10 AK033014:10 AK088216:15 AK163217:15 NM_001362899:-26 NM_146243:-26 LF198393:-27 MA433970:-27 BC047530:27 |
TATA-Box annotation
| Distance to TSS: | 50 |
|---|---|
| Nearest PromoterID: | NM_001362899 |
| Entrez ID: | 66713 |
| Nearest Unigene: | Mm.259045 |
| Nearest Refseq: | NM_146243 |
| Nearest Ensembl: | ENSMUSG00000020152 |
| Gene Name: | ARP2 actin-related protein 2 |
| Gene Alias: | 4921510D23Rik|AA409782|Arp2|D6Ertd746e |
| Gene Description: | ARP2 actin-related protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
