Difference between revisions of "TSS:Hg 103636.1"
From referenceTSS
| Line 2: | Line 2: | ||
|SPC= | |SPC= | ||
|UCNIII= | |UCNIII= | ||
| − | |all_trans=BC100867:-31 BC100868:-31 BC100869:-31 BC100870:-31 | + | |all_trans=BC100867:-31 BC100868:-31 BC100869:-31 BC100870:-31 ENST00000380433.5:-157 NM_053049:-157 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=-31 | |distance=-31 | ||
| − | |distance_to_tss= | + | |distance_to_tss=160 |
|end=5365130 | |end=5365130 | ||
|end_of_center_position=5365127 | |end_of_center_position=5365127 | ||
|entrez_id=114131 | |entrez_id=114131 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=SCP | + | |gene_alias=SCP{{!}}SPC{{!}}UCNIII |
|gene_description=urocortin 3 | |gene_description=urocortin 3 | ||
|gene_id=114131 | |gene_id=114131 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_053049 | |nearest_refseq=NM_053049 | ||
|nearest_unigene=Hs.511775 | |nearest_unigene=Hs.511775 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=5365122 | |start=5365122 | ||
Revision as of 17:31, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5365126 |
|---|---|
| End of the center position in the TSS region: | 5365127 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC100867 BC100868 BC100869 BC100870 |
|---|---|
| Distance: | -31 |
| Num_trans: | 6 |
| All_trans: | BC100867:-31 BC100868:-31 BC100869:-31 BC100870:-31 ENST00000380433.5:-157 NM_053049:-157 |
TATA-Box annotation
| Distance to TSS: | 160 |
|---|---|
| Nearest PromoterID: | NM_053049 |
| Entrez ID: | 114131 |
| Nearest Unigene: | Hs.511775 |
| Nearest Refseq: | NM_053049 |
| Nearest Ensembl: | ENSG00000178473 |
| Gene Name: | urocortin 3 |
| Gene Alias: | SCP|SPC|UCNIII |
| Gene Description: | urocortin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
