Difference between revisions of "TSS:Hg 14872.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000414115.5:62 uc057ljo.1:62 ENST00000444179.5:81 uc057ljp.1:81 AB208849:374 |chr=chr1 |cpg_percent=0 |distance=62 |distance_to_tss=1773 |end=1549...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SHCA= | ||
|all_trans=ENST00000414115.5:62 uc057ljo.1:62 ENST00000444179.5:81 uc057ljp.1:81 AB208849:374 | |all_trans=ENST00000414115.5:62 uc057ljo.1:62 ENST00000444179.5:81 uc057ljp.1:81 AB208849:374 | ||
|chr=chr1 | |chr=chr1 | ||
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|distance_to_tss=1773 | |distance_to_tss=1773 | ||
|end=154968993 | |end=154968993 | ||
| + | |end_of_center_position=154968974 | ||
|entrez_id=6464 | |entrez_id=6464 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=SHC | + | |gene_alias=SHC |
|gene_description=SHC adaptor protein 1 | |gene_description=SHC adaptor protein 1 | ||
|gene_id=6464 | |gene_id=6464 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=154968954 | |start=154968954 | ||
| + | |start_of_center_position=154968973 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000414115.5 uc057ljo.1 | |transcript_name=ENST00000414115.5 uc057ljo.1 | ||
Revision as of 09:28, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 154968973 |
|---|---|
| End of the center position in the TSS region: | 154968974 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000414115.5 uc057ljo.1 |
|---|---|
| Distance: | 62 |
| Num_trans: | 5 |
| All_trans: | ENST00000414115.5:62 uc057ljo.1:62 ENST00000444179.5:81 uc057ljp.1:81 AB208849:374 |
TATA-Box annotation
| Distance to TSS: | 1773 |
|---|---|
| Nearest PromoterID: | NM_001130040 |
| Entrez ID: | 6464 |
| Nearest Unigene: | Hs.433795 |
| Nearest Refseq: | NM_003029 |
| Nearest Ensembl: | ENSG00000160691 |
| Gene Name: | SHC (Src homology 2 domain containing) transforming protein 1 |
| Gene Alias: | SHC |
| Gene Description: | SHC adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
