Difference between revisions of "TSS:Hg 14882.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK225332:0 BX647136:-30 U73377:-39 ENST00000368445.9:-60 uc001ffv.4:-60 BC011813:-60 BC017283:-60 AK296786:-63 ENST00000448116.6:-66 ENST00000368449.8:-...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SHCA= | ||
|all_trans=AK225332:0 BX647136:-30 U73377:-39 ENST00000368445.9:-60 uc001ffv.4:-60 BC011813:-60 BC017283:-60 AK296786:-63 ENST00000448116.6:-66 ENST00000368449.8:-66 NM_001130040:-66 NM_183001:-66 uc057ljk.1:-66 uc001ffw.3:-66 BC033925:-66 BX647149:-66 AK096169:-66 AB451255:141 AB451379:141 AB527815:141 HQ448284:470 KJ892137:470 CU680810:470 | |all_trans=AK225332:0 BX647136:-30 U73377:-39 ENST00000368445.9:-60 uc001ffv.4:-60 BC011813:-60 BC017283:-60 AK296786:-63 ENST00000448116.6:-66 ENST00000368449.8:-66 NM_001130040:-66 NM_183001:-66 uc057ljk.1:-66 uc001ffw.3:-66 BC033925:-66 BX647149:-66 AK096169:-66 AB451255:141 AB451379:141 AB527815:141 HQ448284:470 KJ892137:470 CU680810:470 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=73 | |distance_to_tss=73 | ||
|end=154970681 | |end=154970681 | ||
| + | |end_of_center_position=154970674 | ||
|entrez_id=6464 | |entrez_id=6464 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=SHC | + | |gene_alias=SHC |
|gene_description=SHC adaptor protein 1 | |gene_description=SHC adaptor protein 1 | ||
|gene_id=6464 | |gene_id=6464 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=154970666 | |start=154970666 | ||
| + | |start_of_center_position=154970673 | ||
|strand=- | |strand=- | ||
|transcript_name=AK225332 | |transcript_name=AK225332 | ||
Revision as of 09:29, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 154970673 |
|---|---|
| End of the center position in the TSS region: | 154970674 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK225332 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | AK225332:0 BX647136:-30 U73377:-39 ENST00000368445.9:-60 uc001ffv.4:-60 BC011813:-60 BC017283:-60 AK296786:-63 ENST00000448116.6:-66 ENST00000368449.8:-66 NM_001130040:-66 NM_183001:-66 uc057ljk.1:-66 uc001ffw.3:-66 BC033925:-66 BX647149:-66 AK096169:-66 AB451255:141 AB451379:141 AB527815:141 HQ448284:470 KJ892137:470 CU680810:470 |
TATA-Box annotation
| Distance to TSS: | 73 |
|---|---|
| Nearest PromoterID: | NM_001130040 |
| Entrez ID: | 6464 |
| Nearest Unigene: | Hs.433795 |
| Nearest Refseq: | NM_003029 |
| Nearest Ensembl: | ENSG00000160691 |
| Gene Name: | SHC (Src homology 2 domain containing) transforming protein 1 |
| Gene Alias: | SHC |
| Gene Description: | SHC adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
