Difference between revisions of "TSS:Hg 14883.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BX647136:0 U73377:-4 ENST00000368445.9:-25 uc001ffv.4:-25 BC011813:-25 BC017283:-25 AK296786:-28 ENST00000448116.6:-31 ENST00000368449.8:-31 NM_00113004...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SHCA= | ||
|all_trans=BX647136:0 U73377:-4 ENST00000368445.9:-25 uc001ffv.4:-25 BC011813:-25 BC017283:-25 AK296786:-28 ENST00000448116.6:-31 ENST00000368449.8:-31 NM_001130040:-31 NM_183001:-31 uc057ljk.1:-31 uc001ffw.3:-31 BC033925:-31 BX647149:-31 AK096169:-31 AK225332:34 AB451255:180 AB451379:180 AB527815:180 | |all_trans=BX647136:0 U73377:-4 ENST00000368445.9:-25 uc001ffv.4:-25 BC011813:-25 BC017283:-25 AK296786:-28 ENST00000448116.6:-31 ENST00000368449.8:-31 NM_001130040:-31 NM_183001:-31 uc057ljk.1:-31 uc001ffw.3:-31 BC033925:-31 BX647149:-31 AK096169:-31 AK225332:34 AB451255:180 AB451379:180 AB527815:180 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=36 | |distance_to_tss=36 | ||
|end=154970716 | |end=154970716 | ||
| + | |end_of_center_position=154970711 | ||
|entrez_id=6464 | |entrez_id=6464 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=SHC | + | |gene_alias=SHC |
|gene_description=SHC adaptor protein 1 | |gene_description=SHC adaptor protein 1 | ||
|gene_id=6464 | |gene_id=6464 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=154970705 | |start=154970705 | ||
| + | |start_of_center_position=154970710 | ||
|strand=- | |strand=- | ||
|transcript_name=BX647136 | |transcript_name=BX647136 | ||
Revision as of 09:29, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 154970710 |
|---|---|
| End of the center position in the TSS region: | 154970711 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BX647136 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | BX647136:0 U73377:-4 ENST00000368445.9:-25 uc001ffv.4:-25 BC011813:-25 BC017283:-25 AK296786:-28 ENST00000448116.6:-31 ENST00000368449.8:-31 NM_001130040:-31 NM_183001:-31 uc057ljk.1:-31 uc001ffw.3:-31 BC033925:-31 BX647149:-31 AK096169:-31 AK225332:34 AB451255:180 AB451379:180 AB527815:180 |
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NM_001130040 |
| Entrez ID: | 6464 |
| Nearest Unigene: | Hs.433795 |
| Nearest Refseq: | NM_003029 |
| Nearest Ensembl: | ENSG00000160691 |
| Gene Name: | SHC (Src homology 2 domain containing) transforming protein 1 |
| Gene Alias: | SHC |
| Gene Description: | SHC adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
