Difference between revisions of "TSS:Hg 14885.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000448116.6:10 ENST00000368449.8:10 NM_001130040:10 NM_183001:10 uc057ljk.1:10 uc001ffw.3:10 BC033925:10 BX647149:10 AK096169:10 AK296786:13 ENST0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SHCA= | ||
|all_trans=ENST00000448116.6:10 ENST00000368449.8:10 NM_001130040:10 NM_183001:10 uc057ljk.1:10 uc001ffw.3:10 BC033925:10 BX647149:10 AK096169:10 AK296786:13 ENST00000368445.9:16 uc001ffv.4:16 BC011813:16 BC017283:16 U73377:37 BX647136:46 AK225332:85 AB451255:231 AB451379:231 AB527815:231 | |all_trans=ENST00000448116.6:10 ENST00000368449.8:10 NM_001130040:10 NM_183001:10 uc057ljk.1:10 uc001ffw.3:10 BC033925:10 BX647149:10 AK096169:10 AK296786:13 ENST00000368445.9:16 uc001ffv.4:16 BC011813:16 BC017283:16 U73377:37 BX647136:46 AK225332:85 AB451255:231 AB451379:231 AB527815:231 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-16 | |distance_to_tss=-16 | ||
|end=154970769 | |end=154970769 | ||
| + | |end_of_center_position=154970763 | ||
|entrez_id=6464 | |entrez_id=6464 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=SHC | + | |gene_alias=SHC |
|gene_description=SHC adaptor protein 1 | |gene_description=SHC adaptor protein 1 | ||
|gene_id=6464 | |gene_id=6464 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=154970756 | |start=154970756 | ||
| + | |start_of_center_position=154970762 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000448116.6 ENST00000368449.8 NM_001130040 NM_183001 uc057ljk.1 uc001ffw.3 BC033925 BX647149 AK096169 | |transcript_name=ENST00000448116.6 ENST00000368449.8 NM_001130040 NM_183001 uc057ljk.1 uc001ffw.3 BC033925 BX647149 AK096169 | ||
Revision as of 09:29, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 154970762 |
|---|---|
| End of the center position in the TSS region: | 154970763 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000448116.6 ENST00000368449.8 NM_001130040 NM_183001 uc057ljk.1 uc001ffw.3 BC033925 BX647149 AK096169 |
|---|---|
| Distance: | 10 |
| Num_trans: | 20 |
| All_trans: | ENST00000448116.6:10 ENST00000368449.8:10 NM_001130040:10 NM_183001:10 uc057ljk.1:10 uc001ffw.3:10 BC033925:10 BX647149:10 AK096169:10 AK296786:13 ENST00000368445.9:16 uc001ffv.4:16 BC011813:16 BC017283:16 U73377:37 BX647136:46 AK225332:85 AB451255:231 AB451379:231 AB527815:231 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_183001 |
| Entrez ID: | 6464 |
| Nearest Unigene: | Hs.433795 |
| Nearest Refseq: | NM_003029 |
| Nearest Ensembl: | ENSG00000160691 |
| Gene Name: | SHC (Src homology 2 domain containing) transforming protein 1 |
| Gene Alias: | SHC |
| Gene Description: | SHC adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
