Difference between revisions of "TSS:Hg 232189.1"
From referenceTSS
| Line 3: | Line 3: | ||
|P450-J= | |P450-J= | ||
|P450C2E= | |P450C2E= | ||
| + | |all_trans=ENST00000440282.5:-19 AL832195:-19 ENST00000469555.1:78 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=-19 |
|distance_to_tss=4905 | |distance_to_tss=4905 | ||
|end=133532272 | |end=133532272 | ||
| Line 11: | Line 12: | ||
|entrez_id=1571 | |entrez_id=1571 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=CPE1 | + | |gene_alias=CPE1{{!}}CYP2E{{!}}P450-J{{!}}P450C2E |
|gene_description=cytochrome P450 family 2 subfamily E member 1 | |gene_description=cytochrome P450 family 2 subfamily E member 1 | ||
| − | |gene_name= | + | |gene_id=222389 |
| + | |gene_name=BEN domain containing 7 | ||
| + | |gene_source=HGNC:23514 | ||
| + | |gene_symbol=BEND7 | ||
| + | |gene_synonyms=FLJ40283 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23514 | ||
|nearest_ensembl=ENSG00000130649 | |nearest_ensembl=ENSG00000130649 | ||
|nearest_promoter_id=NM_000773 | |nearest_promoter_id=NM_000773 | ||
|nearest_refseq=NM_000773 | |nearest_refseq=NM_000773 | ||
|nearest_unigene=Hs.12907 | |nearest_unigene=Hs.12907 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=133532263 | |start=133532263 | ||
|start_of_center_position=13481053 | |start_of_center_position=13481053 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000440282.5 AL832195 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232189.1 | |tss_id=hg_232189.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A0A0MSS7 | ||
}} | }} | ||
Revision as of 12:18, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 13481053 |
|---|---|
| End of the center position in the TSS region: | 13481054 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000440282.5 AL832195 |
|---|---|
| Distance: | -19 |
| Num_trans: | 3 |
| All_trans: | ENST00000440282.5:-19 AL832195:-19 ENST00000469555.1:78 |
TATA-Box annotation
| Distance to TSS: | 4905 |
|---|---|
| Nearest PromoterID: | NM_000773 |
| Entrez ID: | 1571 |
| Nearest Unigene: | Hs.12907 |
| Nearest Refseq: | NM_000773 |
| Nearest Ensembl: | ENSG00000130649 |
| Gene Name: | BEN domain containing 7 |
| Gene Alias: | CPE1|CYP2E|P450-J|P450C2E |
| Gene Description: | cytochrome P450 family 2 subfamily E member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
