Difference between revisions of "TSS:Hg 108310.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000466271.1:0 | + | |all_trans=ENST00000466271.1:0 NM_001370075:0 NM_001378151:0 NM_001369863:0 NM_001378149:0 NM_001378150:0 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=7 |
|end=13529042 | |end=13529042 | ||
|end_of_center_position=13529007 | |end_of_center_position=13529007 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:23514 | |hgnc_mgi_id=HGNC:23514 | ||
|nearest_ensembl=ENSG00000165626 | |nearest_ensembl=ENSG00000165626 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001369863 |
|nearest_refseq=NM_152751 | |nearest_refseq=NM_152751 | ||
|nearest_unigene=Hs.498740 | |nearest_unigene=Hs.498740 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=13528971 | |start=13528971 | ||
|start_of_center_position=13529006 | |start_of_center_position=13529006 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000466271.1 | + | |transcript_name=ENST00000466271.1 NM_001370075 NM_001378151 NM_001369863 NM_001378149 NM_001378150 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_108310.1 | |tss_id=hg_108310.1 | ||
Revision as of 19:21, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 13529006 |
|---|---|
| End of the center position in the TSS region: | 13529007 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000466271.1 NM_001370075 NM_001378151 NM_001369863 NM_001378149 NM_001378150 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000466271.1:0 NM_001370075:0 NM_001378151:0 NM_001369863:0 NM_001378149:0 NM_001378150:0 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_001369863 |
| Entrez ID: | 222389 |
| Nearest Unigene: | Hs.498740 |
| Nearest Refseq: | NM_152751 |
| Nearest Ensembl: | ENSG00000165626 |
| Gene Name: | BEN domain containing 7 |
| Gene Alias: | C10orf30 |
| Gene Description: | BEN domain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.870647 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
