Difference between revisions of "TSS:Hg 104529.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=1354 |
|end=29633620 | |end=29633620 | ||
|end_of_center_position=29633617 | |end_of_center_position=29633617 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=29633616 | |start_of_center_position=29633616 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-36(CTCTATAAATAC,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:52, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 29633616 |
|---|---|
| End of the center position in the TSS region: | 29633617 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1354 |
|---|---|
| Nearest PromoterID: | NM_021738 |
| Entrez ID: | 6840 |
| Nearest Unigene: | Hs.499209 |
| Nearest Refseq: | NM_003174 |
| Nearest Ensembl: | ENSG00000197321 |
| Gene Name: | SVIL |
| Gene Alias: | - |
| Gene Description: | supervillin |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -36(CTCTATAAATAC,-,0.00) |
