Difference between revisions of "TSS:Hg 104779.1"
From referenceTSS
| Line 2: | Line 2: | ||
|FIG= | |FIG= | ||
|Fseg= | |Fseg= | ||
| − | |all_trans=ENST00000465735.5 | + | |all_trans=ENST00000465735.5:418 AK092770:418 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=418 | |distance=418 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-1807 |
|end=44980621 | |end=44980621 | ||
|end_of_center_position=44980616 | |end_of_center_position=44980616 | ||
|entrez_id=11067 | |entrez_id=11067 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=DEPP | + | |gene_alias=C10orf10{{!}}DEPP{{!}}FIG{{!}}Fseg |
| − | |gene_description= | + | |gene_description=DEPP1 autophagy regulator |
|gene_id=83937 | |gene_id=83937 | ||
|gene_name=Ras association domain family member 4 | |gene_name=Ras association domain family member 4 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_007021 | |nearest_refseq=NM_007021 | ||
|nearest_unigene=Hs.93675 | |nearest_unigene=Hs.93675 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=44980610 | |start=44980610 | ||
|start_of_center_position=44980615 | |start_of_center_position=44980615 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000465735.5 | + | |transcript_name=ENST00000465735.5 AK092770 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104779.1 | |tss_id=hg_104779.1 | ||
Revision as of 17:58, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 44980615 |
|---|---|
| End of the center position in the TSS region: | 44980616 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000465735.5 AK092770 |
|---|---|
| Distance: | 418 |
| Num_trans: | 2 |
| All_trans: | ENST00000465735.5:418 AK092770:418 |
TATA-Box annotation
| Distance to TSS: | -1807 |
|---|---|
| Nearest PromoterID: | NM_007021 |
| Entrez ID: | 11067 |
| Nearest Unigene: | Hs.93675 |
| Nearest Refseq: | NM_007021 |
| Nearest Ensembl: | ENSG00000165507 |
| Gene Name: | Ras association domain family member 4 |
| Gene Alias: | C10orf10|DEPP|FIG|Fseg |
| Gene Description: | DEPP1 autophagy regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
