Difference between revisions of "TSS:Hg 220063.1"
From referenceTSS
| Line 7: | Line 7: | ||
|SAPK1= | |SAPK1= | ||
|SAPK1c= | |SAPK1c= | ||
| − | |all_trans=ENST00000374174 | + | |all_trans=ENST00000374174.1:-50 AB451354:-50 AB451231:-50 DQ234352:-50 AB451398:-50 AB451271:-50 AB527605:-51 HQ258413:-58 KJ891893:-58 U34822:-62 ENST00000374176.8:-63 U35005:-63 U35004:-67 L26318:-67 LP764850:-67 LP764851:-67 LP764852:-67 LP764853:-67 ENST00000374182.7:-68 ENST00000360332.7:-99 NM_001278548:-99 BC130570:-112 BC130572:-112 BC144063:-112 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 16: | Line 16: | ||
|entrez_id=5599 | |entrez_id=5599 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
| − | |gene_alias=JNK | + | |gene_alias=JNK{{!}}JNK-46{{!}}JNK1{{!}}JNK1A2{{!}}JNK21B1/2{{!}}PRKM8{{!}}SAPK1{{!}}SAPK1c |
|gene_description=mitogen-activated protein kinase 8 | |gene_description=mitogen-activated protein kinase 8 | ||
|gene_id=5599 | |gene_id=5599 | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_002750 | |nearest_refseq=NM_002750 | ||
|nearest_unigene=Hs.138211 | |nearest_unigene=Hs.138211 | ||
| − | |num_trans= | + | |num_trans=24 |
|species=human | |species=human | ||
|start=48401710 | |start=48401710 | ||
|start_of_center_position=48401710 | |start_of_center_position=48401710 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000374174 | + | |transcript_name=ENST00000374174.1 AB451354 AB451231 DQ234352 AB451398 AB451271 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_220063.1 | |tss_id=hg_220063.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B5BUB8 |
}} | }} | ||
Revision as of 08:21, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48401710 |
|---|---|
| End of the center position in the TSS region: | 48401711 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374174.1 AB451354 AB451231 DQ234352 AB451398 AB451271 |
|---|---|
| Distance: | -50 |
| Num_trans: | 24 |
| All_trans: | ENST00000374174.1:-50 AB451354:-50 AB451231:-50 DQ234352:-50 AB451398:-50 AB451271:-50 AB527605:-51 HQ258413:-58 KJ891893:-58 U34822:-62 ENST00000374176.8:-63 U35005:-63 U35004:-67 L26318:-67 LP764850:-67 LP764851:-67 LP764852:-67 LP764853:-67 ENST00000374182.7:-68 ENST00000360332.7:-99 NM_001278548:-99 BC130570:-112 BC130572:-112 BC144063:-112 |
TATA-Box annotation
| Distance to TSS: | 99 |
|---|---|
| Nearest PromoterID: | NM_001278548 |
| Entrez ID: | 5599 |
| Nearest Unigene: | Hs.138211 |
| Nearest Refseq: | NM_002750 |
| Nearest Ensembl: | ENSG00000107643 |
| Gene Name: | mitogen-activated protein kinase 8 |
| Gene Alias: | JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c |
| Gene Description: | mitogen-activated protein kinase 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
