Difference between revisions of "TSS:Hg 105236.1"
From referenceTSS
| Line 4: | Line 4: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-2323 |
|end=68335253 | |end=68335253 | ||
|end_of_center_position=68335252 | |end_of_center_position=68335252 | ||
|entrez_id=64081 | |entrez_id=64081 | ||
|gc_percent=0.308458 | |gc_percent=0.308458 | ||
| − | |gene_alias=HEL-S-306 | + | |gene_alias=HEL-S-306{{!}}MAWBP{{!}}MAWDBP |
|gene_description=phenazine biosynthesis like protein domain containing | |gene_description=phenazine biosynthesis like protein domain containing | ||
|gene_name=PBLD | |gene_name=PBLD | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000108187 | |nearest_ensembl=ENSG00000108187 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001033083 |
|nearest_refseq=NM_022129 | |nearest_refseq=NM_022129 | ||
|nearest_unigene=Hs.198158 | |nearest_unigene=Hs.198158 | ||
| Line 23: | Line 23: | ||
|start_of_center_position=68335251 | |start_of_center_position=68335251 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=9(CTCCTTAAATGC,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:09, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68335251 |
|---|---|
| End of the center position in the TSS region: | 68335252 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -2323 |
|---|---|
| Nearest PromoterID: | NM_001033083 |
| Entrez ID: | 64081 |
| Nearest Unigene: | Hs.198158 |
| Nearest Refseq: | NM_022129 |
| Nearest Ensembl: | ENSG00000108187 |
| Gene Name: | PBLD |
| Gene Alias: | HEL-S-306|MAWBP|MAWDBP |
| Gene Description: | phenazine biosynthesis like protein domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.308458 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 9(CTCCTTAAATGC,-,0.00) |
