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Difference between revisions of "TSS:Hg 232351.1"

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Line 3: Line 3:
 
|RH-II/GU=
 
|RH-II/GU=
 
|RH-II/GuA=
 
|RH-II/GuA=
|all_trans=CU674121:-186
+
|all_trans=ENST00000677255.1:62 ENST00000676699.1:106 ENST00000676683.1:106 ENST00000677659.1:294 ENST00000676609.1:324 ENST00000676923.1:359 BC016172:363 ENST00000679349.1:364 ENST00000373255.9:364 NM_018649:364 AK022776:364 AK131057:368 AF151534:379 AF336304:387 AK022475:395 ENST00000678178.1:398 ENST00000676608.1:398 ENST00000455786.1:398
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.04
 
|cpg_percent=0.04
|distance=-186
+
|distance=62
|distance_to_tss=-9683
+
|distance_to_tss=-9730
 
|end=68946443
 
|end=68946443
 
|end_of_center_position=70052482
 
|end_of_center_position=70052482
 
|entrez_id=9188
 
|entrez_id=9188
 
|gc_percent=0.517413
 
|gc_percent=0.517413
|gene_alias=GUA
+
|gene_alias=GUA{{!}}GURDB{{!}}RH-II/GU{{!}}RH-II/GuA
 
|gene_description=DExD-box helicase 21
 
|gene_description=DExD-box helicase 21
|gene_name=DDX21
+
|gene_id=55506
 +
|gene_name=macroH2A.2 histone
 +
|gene_source=HGNC:14453
 +
|gene_symbol=MACROH2A2
 +
|gene_synonyms=
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=HGNC:14453
 
|nearest_ensembl=ENSG00000165732
 
|nearest_ensembl=ENSG00000165732
 
|nearest_promoter_id=NM_004728
 
|nearest_promoter_id=NM_004728
 
|nearest_refseq=NM_004728
 
|nearest_refseq=NM_004728
 
|nearest_unigene=Hs.223141
 
|nearest_unigene=Hs.223141
|num_trans=1
+
|num_trans=18
 
|species=human
 
|species=human
 
|start=68946436
 
|start=68946436
 
|start_of_center_position=70052481
 
|start_of_center_position=70052481
 
|strand=-
 
|strand=-
|transcript_name=CU674121
+
|transcript_name=ENST00000677255.1
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=hg_232351.1
 
|tss_id=hg_232351.1
 
|tss_score=1
 
|tss_score=1
 +
|uniprot_id=
 
}}
 
}}

Revision as of 12:22, 17 June 2021

Basic information about the TSS


TSS ID:hg_232351.1
Species:human
Chr:chr10
TSS Classification:no
Start:68946436
End:68946443
Strand:-
TSS Score:1
Start of the center position in the TSS region:70052481
End of the center position in the TSS region:70052482



Gene and protein annotation


Transcript_name:ENST00000677255.1
Distance:62
GeneID:55506
HGNC/MGI_ID:HGNC:14453
UniProt_ID:
Gene_name:macroH2A.2 histone
Gene_symbol:MACROH2A2
Gene_synonyms:
Gene_source:HGNC:14453



Transcript annotation


Transcript_name:ENST00000677255.1
Distance:62
Num_trans:18
All_trans:ENST00000677255.1:62 ENST00000676699.1:106 ENST00000676683.1:106 ENST00000677659.1:294 ENST00000676609.1:324 ENST00000676923.1:359 BC016172:363 ENST00000679349.1:364 ENST00000373255.9:364 NM_018649:364 AK022776:364 AK131057:368 AF151534:379 AF336304:387 AK022475:395 ENST00000678178.1:398 ENST00000676608.1:398 ENST00000455786.1:398



TATA-Box annotation


Distance to TSS:-9730
Nearest PromoterID:NM_004728
Entrez ID:9188
Nearest Unigene:Hs.223141
Nearest Refseq:NM_004728
Nearest Ensembl:ENSG00000165732
Gene Name:macroH2A.2 histone
Gene Alias:GUA|GURDB|RH-II/GU|RH-II/GuA
Gene Description:DExD-box helicase 21
Gene Type:protein-coding
CpG%:0.04
GC%:0.517413
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):