Difference between revisions of "TSS:Hg 105481.1"
From referenceTSS
| Line 3: | Line 3: | ||
|CENP-27= | |CENP-27= | ||
|MSAG= | |MSAG= | ||
| − | |all_trans=ENST00000615507.4:336 ENST00000621663.4:336 NM_001242548:336 | + | |all_trans=LF208756:304 MA444333:304 ENST00000615507.4:336 ENST00000621663.4:336 NM_001242548:336 NM_001242546:336 ENST00000299381.5:348 NM_001366791:348 NM_001242547:348 NR_038392:348 NR_038391:348 NM_173473:348 ENST00000478193.5:365 EU552924:377 BC009530:384 |
|bA570G20.3= | |bA570G20.3= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=304 |
| − | |distance_to_tss= | + | |distance_to_tss=299 |
|end=72215664 | |end=72215664 | ||
|end_of_center_position=72215658 | |end_of_center_position=72215658 | ||
| − | |entrez_id= | + | |entrez_id=51008 |
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias= | + | |gene_alias=ASC1p50{{!}}CGI-18{{!}}SMABF2{{!}}p50 |
| − | |gene_description= | + | |gene_description=activating signal cointegrator 1 complex subunit 1 |
|gene_id=119504 | |gene_id=119504 | ||
| − | |gene_name= | + | |gene_name=ASCC1 |
|gene_source=HGNC:26976 | |gene_source=HGNC:26976 | ||
|gene_symbol=ANAPC16 | |gene_symbol=ANAPC16 | ||
| Line 22: | Line 22: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:26976 | |hgnc_mgi_id=HGNC:26976 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000138303 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001369091 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_015947 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.500007 |
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=72215650 | |start=72215650 | ||
|start_of_center_position=72215657 | |start_of_center_position=72215657 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF208756 MA444333 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105481.1 | |tss_id=hg_105481.1 | ||
Latest revision as of 18:15, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72215657 |
|---|---|
| End of the center position in the TSS region: | 72215658 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF208756 MA444333 |
|---|---|
| Distance: | 304 |
| Num_trans: | 15 |
| All_trans: | LF208756:304 MA444333:304 ENST00000615507.4:336 ENST00000621663.4:336 NM_001242548:336 NM_001242546:336 ENST00000299381.5:348 NM_001366791:348 NM_001242547:348 NR_038392:348 NR_038391:348 NM_173473:348 ENST00000478193.5:365 EU552924:377 BC009530:384 |
TATA-Box annotation
| Distance to TSS: | 299 |
|---|---|
| Nearest PromoterID: | NM_001369091 |
| Entrez ID: | 51008 |
| Nearest Unigene: | Hs.500007 |
| Nearest Refseq: | NM_015947 |
| Nearest Ensembl: | ENSG00000138303 |
| Gene Name: | ASCC1 |
| Gene Alias: | ASC1p50|CGI-18|SMABF2|p50 |
| Gene Description: | activating signal cointegrator 1 complex subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
