Difference between revisions of "TSS:Hg 110130.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=LF209955:-102 MA445532:-102 ENST00000372745.1:190 BC026232:190 AK299352:196 ENST00000355264.9:204 NM_001320265:204 NR_135191:204 NM_012095:204 NM_001320264:204 NM_001320263:204 NM_207012:204 AK026983:212 AK315597:238 BC067127:271 ENST00000487653.1:275 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance=- | + | |distance=-102 |
| − | |distance_to_tss= | + | |distance_to_tss=-146 |
|end=74151046 | |end=74151046 | ||
|end_of_center_position=74151039 | |end_of_center_position=74151039 | ||
| − | |entrez_id= | + | |entrez_id=132 |
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias= | + | |gene_alias=AK |
| − | |gene_description= | + | |gene_description=adenosine kinase |
|gene_id=26985 | |gene_id=26985 | ||
| − | |gene_name= | + | |gene_name=ADK |
|gene_source=HGNC:569 | |gene_source=HGNC:569 | ||
|gene_symbol=AP3M1 | |gene_symbol=AP3M1 | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:569 | |hgnc_mgi_id=HGNC:569 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000156110 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001202450 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001123 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.656586 |
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=74151031 | |start=74151031 | ||
|start_of_center_position=74151038 | |start_of_center_position=74151038 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF209955 MA445532 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_110130.1 | |tss_id=hg_110130.1 | ||
Latest revision as of 20:03, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74151038 |
|---|---|
| End of the center position in the TSS region: | 74151039 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF209955 MA445532 |
|---|---|
| Distance: | -102 |
| Num_trans: | 16 |
| All_trans: | LF209955:-102 MA445532:-102 ENST00000372745.1:190 BC026232:190 AK299352:196 ENST00000355264.9:204 NM_001320265:204 NR_135191:204 NM_012095:204 NM_001320264:204 NM_001320263:204 NM_207012:204 AK026983:212 AK315597:238 BC067127:271 ENST00000487653.1:275 |
TATA-Box annotation
| Distance to TSS: | -146 |
|---|---|
| Nearest PromoterID: | NM_001202450 |
| Entrez ID: | 132 |
| Nearest Unigene: | Hs.656586 |
| Nearest Refseq: | NM_001123 |
| Nearest Ensembl: | ENSG00000156110 |
| Gene Name: | ADK |
| Gene Alias: | AK |
| Gene Description: | adenosine kinase |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
