Difference between revisions of "TSS:Hg 105968.1"
From referenceTSS
| Line 2: | Line 2: | ||
|KIAA0261= | |KIAA0261= | ||
|WAPAL= | |WAPAL= | ||
| + | |all_trans=LF333963:20 MA569540:20 LF333962:158 MA569539:158 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=20 |
| − | |distance_to_tss=- | + | |distance_to_tss=-694 |
|end=86522489 | |end=86522489 | ||
|end_of_center_position=86522487 | |end_of_center_position=86522487 | ||
|entrez_id=23063 | |entrez_id=23063 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| − | |gene_alias=FOE | + | |gene_alias=FOE{{!}}KIAA0261{{!}}WAPAL |
|gene_description=WAPL cohesin release factor | |gene_description=WAPL cohesin release factor | ||
|gene_name=WAPL | |gene_name=WAPL | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000062650 | |nearest_ensembl=ENSG00000062650 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_015045 |
|nearest_refseq=NM_015045 | |nearest_refseq=NM_015045 | ||
|nearest_unigene=Hs.203099 | |nearest_unigene=Hs.203099 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=86522483 | |start=86522483 | ||
|start_of_center_position=86522486 | |start_of_center_position=86522486 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF333963 MA569540 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105968.1 | |tss_id=hg_105968.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86522486 |
|---|---|
| End of the center position in the TSS region: | 86522487 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF333963 MA569540 |
|---|---|
| Distance: | 20 |
| Num_trans: | 4 |
| All_trans: | LF333963:20 MA569540:20 LF333962:158 MA569539:158 |
TATA-Box annotation
| Distance to TSS: | -694 |
|---|---|
| Nearest PromoterID: | NM_015045 |
| Entrez ID: | 23063 |
| Nearest Unigene: | Hs.203099 |
| Nearest Refseq: | NM_015045 |
| Nearest Ensembl: | ENSG00000062650 |
| Gene Name: | WAPL |
| Gene Alias: | FOE|KIAA0261|WAPAL |
| Gene Description: | WAPL cohesin release factor |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
