Difference between revisions of "TSS:Hg 106313.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PLCE= | |PLCE= | ||
|PPLC= | |PPLC= | ||
| − | |all_trans=ENST00000371375.1:-145 | + | |all_trans=ENST00000371375.1:-145 ENST00000675218.1:-145 AF170071:-145 AK289852:-167 AK297779:-185 ENST00000676102.1:-200 ENST00000371385.8:-200 NM_001165979:-214 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 11: | Line 11: | ||
|entrez_id=51196 | |entrez_id=51196 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=NPHS3 | + | |gene_alias=NPHS3{{!}}PLCE{{!}}PPLC |
|gene_description=phospholipase C epsilon 1 | |gene_description=phospholipase C epsilon 1 | ||
|gene_id=51196 | |gene_id=51196 | ||
| Line 29: | Line 29: | ||
|start_of_center_position=94089255 | |start_of_center_position=94089255 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000371375.1 | + | |transcript_name=ENST00000371375.1 ENST00000675218.1 AF170071 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_106313.1 | |tss_id=hg_106313.1 | ||
Revision as of 18:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 94089255 |
|---|---|
| End of the center position in the TSS region: | 94089256 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371375.1 ENST00000675218.1 AF170071 |
|---|---|
| Distance: | -145 |
| Num_trans: | 8 |
| All_trans: | ENST00000371375.1:-145 ENST00000675218.1:-145 AF170071:-145 AK289852:-167 AK297779:-185 ENST00000676102.1:-200 ENST00000371385.8:-200 NM_001165979:-214 |
TATA-Box annotation
| Distance to TSS: | 230 |
|---|---|
| Nearest PromoterID: | NM_001165979 |
| Entrez ID: | 51196 |
| Nearest Unigene: | Hs.655033 |
| Nearest Refseq: | NM_016341 |
| Nearest Ensembl: | ENSG00000138193 |
| Gene Name: | phospholipase C epsilon 1 |
| Gene Alias: | NPHS3|PLCE|PPLC |
| Gene Description: | phospholipase C epsilon 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
