Difference between revisions of "TSS:Hg 106373.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000465148. | + | |all_trans=ENST00000465148.3:0 NM_019084:0 NM_001134375:0 NM_001134376:0 AK297264:0 AK092360:0 BC043175:-127 ENST00000403870.7:-130 ENST00000265992.9:-130 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-26 |
|end=96043591 | |end=96043591 | ||
|end_of_center_position=96043558 | |end_of_center_position=96043558 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_019084 | |nearest_refseq=NM_019084 | ||
|nearest_unigene=Hs.596479 | |nearest_unigene=Hs.596479 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=96043523 | |start=96043523 | ||
|start_of_center_position=96043557 | |start_of_center_position=96043557 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000465148 | + | |transcript_name=ENST00000465148.3 NM_019084 NM_001134375 NM_001134376 AK297264 AK092360 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106373.1 | |tss_id=hg_106373.1 | ||
Revision as of 18:36, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 96043557 |
|---|---|
| End of the center position in the TSS region: | 96043558 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000465148.3 NM_019084 NM_001134375 NM_001134376 AK297264 AK092360 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000465148.3:0 NM_019084:0 NM_001134375:0 NM_001134376:0 AK297264:0 AK092360:0 BC043175:-127 ENST00000403870.7:-130 ENST00000265992.9:-130 |
TATA-Box annotation
| Distance to TSS: | -26 |
|---|---|
| Nearest PromoterID: | NM_019084 |
| Entrez ID: | 54619 |
| Nearest Unigene: | Hs.596479 |
| Nearest Refseq: | NM_019084 |
| Nearest Ensembl: | ENSG00000107443 |
| Gene Name: | cyclin J |
| Gene Alias: | bA690P14.1 |
| Gene Description: | cyclin J |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
