Difference between revisions of "TSS:Hg 106376.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000316045.9:0 ENST00000488700.5:0 | + | |all_trans=ENST00000316045.9:0 ENST00000488700.5:0 NM_001278524:0 NM_001278526:0 NR_138482:0 NM_014803:0 CR627437:0 LF211320:-136 MA446897:-136 BC109045:162 BC109046:167 ENST00000539666.5:319 ENST00000478086.5:319 ENST00000624776.3:319 NM_001278525:319 NM_001330732:319 AK095317:319 BC030967:319 ENST00000563195.1:335 LF345592:394 MA581169:394 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_014803 | |nearest_refseq=NM_014803 | ||
|nearest_unigene=Hs.600823 | |nearest_unigene=Hs.600823 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=96129707 | |start=96129707 | ||
|start_of_center_position=96129722 | |start_of_center_position=96129722 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000316045.9 ENST00000488700.5 NM_014803 | + | |transcript_name=ENST00000316045.9 ENST00000488700.5 NM_001278524 NM_001278526 NR_138482 NM_014803 CR627437 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106376.1 | |tss_id=hg_106376.1 | ||
Revision as of 18:36, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 96129722 |
|---|---|
| End of the center position in the TSS region: | 96129723 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000316045.9 ENST00000488700.5 NM_001278524 NM_001278526 NR_138482 NM_014803 CR627437 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000316045.9:0 ENST00000488700.5:0 NM_001278524:0 NM_001278526:0 NR_138482:0 NM_014803:0 CR627437:0 LF211320:-136 MA446897:-136 BC109045:162 BC109046:167 ENST00000539666.5:319 ENST00000478086.5:319 ENST00000624776.3:319 NM_001278525:319 NM_001330732:319 AK095317:319 BC030967:319 ENST00000563195.1:335 LF345592:394 MA581169:394 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_001278526 |
| Entrez ID: | 9849 |
| Nearest Unigene: | Hs.600823 |
| Nearest Refseq: | NM_014803 |
| Nearest Ensembl: | ENSG00000177853 |
| Gene Name: | zinc finger protein 518A |
| Gene Alias: | ZNF518 |
| Gene Description: | zinc finger protein 518A |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
