Difference between revisions of "TSS:Hg 106419.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|MLR2= | |MLR2= | ||
| − | |all_trans=AB058698:3 ENST00000371097.8 | + | |all_trans=ENST00000676381.1:0 ENST00000674796.1:0 ENST00000675971.1:0 ENST00000674725.1:0 ENST00000676373.1:3 AB058698:3 ENST00000371097.8:-40 AL834245:-40 ENST00000356016.7:-65 ENST00000675125.1:-71 NM_032440:-75 ENST00000675117.1:-84 ENST00000675537.1:-114 MP015211:211 ENST00000676314.1:367 ENST00000675915.1:367 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=84 |
|end=96833039 | |end=96833039 | ||
|end_of_center_position=96833030 | |end_of_center_position=96833030 | ||
|entrez_id=84458 | |entrez_id=84458 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=C10orf12 | + | |gene_alias=C10orf12{{!}}MLR2 |
|gene_description=ligand dependent nuclear receptor corepressor | |gene_description=ligand dependent nuclear receptor corepressor | ||
|gene_id=84458 | |gene_id=84458 | ||
| Line 16: | Line 16: | ||
|gene_source=HGNC:29503 | |gene_source=HGNC:29503 | ||
|gene_symbol=LCOR | |gene_symbol=LCOR | ||
| − | |gene_synonyms=FLJ38026 KIAA1795 MLR2 | + | |gene_synonyms=DKFZP564P1916 FLJ13022 FLJ38026 KIAA1795 MLR2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:29503 | |hgnc_mgi_id=HGNC:29503 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_015652 | |nearest_refseq=NM_015652 | ||
|nearest_unigene=Hs.427927 | |nearest_unigene=Hs.427927 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=96833019 | |start=96833019 | ||
|start_of_center_position=96833029 | |start_of_center_position=96833029 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000676381.1 ENST00000674796.1 ENST00000675971.1 ENST00000674725.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106419.1 | |tss_id=hg_106419.1 | ||
Revision as of 18:37, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 96833029 |
|---|---|
| End of the center position in the TSS region: | 96833030 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000676381.1 ENST00000674796.1 ENST00000675971.1 ENST00000674725.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000676381.1:0 ENST00000674796.1:0 ENST00000675971.1:0 ENST00000674725.1:0 ENST00000676373.1:3 AB058698:3 ENST00000371097.8:-40 AL834245:-40 ENST00000356016.7:-65 ENST00000675125.1:-71 NM_032440:-75 ENST00000675117.1:-84 ENST00000675537.1:-114 MP015211:211 ENST00000676314.1:367 ENST00000675915.1:367 |
TATA-Box annotation
| Distance to TSS: | 84 |
|---|---|
| Nearest PromoterID: | NM_032440 |
| Entrez ID: | 84458 |
| Nearest Unigene: | Hs.427927 |
| Nearest Refseq: | NM_015652 |
| Nearest Ensembl: | ENSG00000196233 |
| Gene Name: | ligand dependent nuclear receptor corepressor |
| Gene Alias: | C10orf12|MLR2 |
| Gene Description: | ligand dependent nuclear receptor corepressor |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
