Difference between revisions of "TSS:Hg 184028.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans=ENST00000398022. | + | |all_trans=ENST00000398022.7:89 NM_014742:89 AK294980:89 AK126534:89 ENST00000442842.5:92 ENST00000450829.5:103 NM_001363731:103 AK302439:103 AK296500:103 BC021107:105 ENST00000217315.9:111 D87444:111 ENST00000417389.1:142 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
− | |distance= | + | |distance=89 |
− | |distance_to_tss= | + | |distance_to_tss=-122 |
|end=32109625 | |end=32109625 | ||
|end_of_center_position=32109593 | |end_of_center_position=32109593 | ||
Line 22: | Line 22: | ||
|nearest_refseq=NM_014742 | |nearest_refseq=NM_014742 | ||
|nearest_unigene=Hs.654665 | |nearest_unigene=Hs.654665 | ||
− | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=32109559 | |start=32109559 | ||
|start_of_center_position=32109592 | |start_of_center_position=32109592 | ||
|strand=+ | |strand=+ | ||
− | |transcript_name=ENST00000398022. | + | |transcript_name=ENST00000398022.7 NM_014742 AK294980 AK126534 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_184028.1 | |tss_id=hg_184028.1 | ||
|tss_score=1 | |tss_score=1 | ||
− | |uniprot_id=A0A024QYR3 Q92544 | + | |uniprot_id=A0A024QYR3 Q6ZTK5 Q92544 |
}} | }} |
Revision as of 00:31, 17 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 32109592 |
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End of the center position in the TSS region: | 32109593 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000398022.7 NM_014742 AK294980 AK126534 |
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Distance: | 89 |
Num_trans: | 13 |
All_trans: | ENST00000398022.7:89 NM_014742:89 AK294980:89 AK126534:89 ENST00000442842.5:92 ENST00000450829.5:103 NM_001363731:103 AK302439:103 AK296500:103 BC021107:105 ENST00000217315.9:111 D87444:111 ENST00000417389.1:142 |
TATA-Box annotation
Distance to TSS: | -122 |
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Nearest PromoterID: | NM_014742 |
Entrez ID: | 9777 |
Nearest Unigene: | Hs.654665 |
Nearest Refseq: | NM_014742 |
Nearest Ensembl: | ENSG00000101337 |
Gene Name: | transmembrane 9 superfamily member 4 |
Gene Alias: | dJ836N17.2 |
Gene Description: | transmembrane 9 superfamily member 4 |
Gene Type: | protein-coding |
CpG%: | 0.035 |
GC%: | 0.512438 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |