Difference between revisions of "TSS:Hg 237964.1"
From referenceTSS
| Line 3: | Line 3: | ||
|ZKSCAN19= | |ZKSCAN19= | ||
|ZSCAN51= | |ZSCAN51= | ||
| + | |all_trans=BC136310:12 BC136311:12 AB383859:78 | ||
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=12 |
|distance_to_tss=-14711 | |distance_to_tss=-14711 | ||
|end=58168278 | |end=58168278 | ||
| Line 11: | Line 12: | ||
|entrez_id=10782 | |entrez_id=10782 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=HFB101 | + | |gene_alias=HFB101{{!}}ZF2{{!}}ZKSCAN19{{!}}ZSCAN51 |
|gene_description=zinc finger protein 274 | |gene_description=zinc finger protein 274 | ||
| − | |gene_name= | + | |gene_id=9371 |
| + | |gene_name=kinesin family member 3B | ||
| + | |gene_source=HGNC:6320 | ||
| + | |gene_symbol=KIF3B | ||
| + | |gene_synonyms=FLA8 KIAA0359 KLP-11 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6320 | ||
|nearest_ensembl=ENSG00000171606 | |nearest_ensembl=ENSG00000171606 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001278734 |
|nearest_refseq=NM_016324 | |nearest_refseq=NM_016324 | ||
|nearest_unigene=Hs.83761 | |nearest_unigene=Hs.83761 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=58168277 | |start=58168277 | ||
|start_of_center_position=32309698 | |start_of_center_position=32309698 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=79(CTCTTTAAAAAA,-,0.00) |
| − | |transcript_name= | + | |transcript_name=BC136310 BC136311 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_237964.1 | |tss_id=hg_237964.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 14:31, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 32309698 |
|---|---|
| End of the center position in the TSS region: | 32309699 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC136310 BC136311 |
|---|---|
| Distance: | 12 |
| Num_trans: | 3 |
| All_trans: | BC136310:12 BC136311:12 AB383859:78 |
TATA-Box annotation
| Distance to TSS: | -14711 |
|---|---|
| Nearest PromoterID: | NM_001278734 |
| Entrez ID: | 10782 |
| Nearest Unigene: | Hs.83761 |
| Nearest Refseq: | NM_016324 |
| Nearest Ensembl: | ENSG00000171606 |
| Gene Name: | kinesin family member 3B |
| Gene Alias: | HFB101|ZF2|ZKSCAN19|ZSCAN51 |
| Gene Description: | zinc finger protein 274 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 79(CTCTTTAAAAAA,-,0.00) |
