Difference between revisions of "TSS:Hg 111703.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TIAR= | |TIAR= | ||
| − | |all_trans= | + | |all_trans=ENST00000436547.7:-61 ENST00000489822.5:-61 AL833106:-61 AK290695:-79 ENST00000497671.5:-126 NM_001323968:-126 NM_001323967:-126 NM_001323965:-126 NM_001323964:-126 NM_001323969:-126 NM_001323970:-126 NM_003252:-126 NR_136663:-126 NR_136662:-126 NR_136661:-126 NM_001033925:-126 BC030025:-126 AK291239:231 ENST00000479729.1:261 AK290984:265 M96954:383 ENST00000369093.6:398 AK295243:419 AY633610:420 AB527493:426 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 10: | Line 10: | ||
|entrez_id=7073 | |entrez_id=7073 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=TCBP | + | |gene_alias=TCBP{{!}}TIAR |
|gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1 | |gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1 | ||
|gene_id=7073 | |gene_id=7073 | ||
| − | |gene_name=TIA1 cytotoxic granule | + | |gene_name=TIA1 cytotoxic granule associated RNA binding protein like 1 |
|gene_source=HGNC:11804 | |gene_source=HGNC:11804 | ||
|gene_symbol=TIAL1 | |gene_symbol=TIAL1 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:11804 | |hgnc_mgi_id=HGNC:11804 | ||
|nearest_ensembl=ENSG00000151923 | |nearest_ensembl=ENSG00000151923 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001323969 |
|nearest_refseq=NM_003252 | |nearest_refseq=NM_003252 | ||
|nearest_unigene=Hs.501203 | |nearest_unigene=Hs.501203 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=119596892 | |start=119596892 | ||
|start_of_center_position=119596897 | |start_of_center_position=119596897 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000489822.5 | + | |transcript_name=ENST00000436547.7 ENST00000489822.5 AL833106 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_111703.1 | |tss_id=hg_111703.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q01085 |
}} | }} | ||
Revision as of 20:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119596897 |
|---|---|
| End of the center position in the TSS region: | 119596898 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000436547.7 ENST00000489822.5 AL833106 |
|---|---|
| Distance: | -61 |
| Num_trans: | 25 |
| All_trans: | ENST00000436547.7:-61 ENST00000489822.5:-61 AL833106:-61 AK290695:-79 ENST00000497671.5:-126 NM_001323968:-126 NM_001323967:-126 NM_001323965:-126 NM_001323964:-126 NM_001323969:-126 NM_001323970:-126 NM_003252:-126 NR_136663:-126 NR_136662:-126 NR_136661:-126 NM_001033925:-126 BC030025:-126 AK291239:231 ENST00000479729.1:261 AK290984:265 M96954:383 ENST00000369093.6:398 AK295243:419 AY633610:420 AB527493:426 |
TATA-Box annotation
| Distance to TSS: | 131 |
|---|---|
| Nearest PromoterID: | NM_001323969 |
| Entrez ID: | 7073 |
| Nearest Unigene: | Hs.501203 |
| Nearest Refseq: | NM_003252 |
| Nearest Ensembl: | ENSG00000151923 |
| Gene Name: | TIA1 cytotoxic granule associated RNA binding protein like 1 |
| Gene Alias: | TCBP|TIAR |
| Gene Description: | TIA1 cytotoxic granule associated RNA binding protein like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
