Difference between revisions of "TSS:Hg 107367.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PPAPDC1= | |PPAPDC1= | ||
|PPAPDC1A= | |PPAPDC1A= | ||
| − | |all_trans= | + | |all_trans=NR_134516:139 NM_001318169:139 NM_001318168:139 NM_001318167:139 NM_001318166:139 BC101267:256 BC101269:256 BC122535:256 BC101268:256 BC132787:316 ENST00000398250.6:412 NM_001030059:412 AK296273:432 HQ258170:486 KJ895775:486 KJ903972:486 AK310178:488 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 11: | Line 11: | ||
|entrez_id=196051 | |entrez_id=196051 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=DPPL2 | + | |gene_alias=DPPL2{{!}}PPAPDC1{{!}}PPAPDC1A |
|gene_description=phospholipid phosphatase 4 | |gene_description=phospholipid phosphatase 4 | ||
|gene_id=196051 | |gene_id=196051 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:23531 | |hgnc_mgi_id=HGNC:23531 | ||
|nearest_ensembl=ENSG00000203805 | |nearest_ensembl=ENSG00000203805 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001318166 |
|nearest_refseq=NM_001030059 | |nearest_refseq=NM_001030059 | ||
|nearest_unigene=Hs.40479 | |nearest_unigene=Hs.40479 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=120456804 | |start=120456804 | ||
|start_of_center_position=120456809 | |start_of_center_position=120456809 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NR_134516 NM_001318169 NM_001318168 NM_001318167 NM_001318166 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_107367.1 | |tss_id=hg_107367.1 | ||
Revision as of 18:59, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120456809 |
|---|---|
| End of the center position in the TSS region: | 120456810 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_134516 NM_001318169 NM_001318168 NM_001318167 NM_001318166 |
|---|---|
| Distance: | 139 |
| Num_trans: | 17 |
| All_trans: | NR_134516:139 NM_001318169:139 NM_001318168:139 NM_001318167:139 NM_001318166:139 BC101267:256 BC101269:256 BC122535:256 BC101268:256 BC132787:316 ENST00000398250.6:412 NM_001030059:412 AK296273:432 HQ258170:486 KJ895775:486 KJ903972:486 AK310178:488 |
TATA-Box annotation
| Distance to TSS: | -144 |
|---|---|
| Nearest PromoterID: | NM_001318166 |
| Entrez ID: | 196051 |
| Nearest Unigene: | Hs.40479 |
| Nearest Refseq: | NM_001030059 |
| Nearest Ensembl: | ENSG00000203805 |
| Gene Name: | phospholipid phosphatase 4 |
| Gene Alias: | DPPL2|PPAPDC1|PPAPDC1A |
| Gene Description: | phospholipid phosphatase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
