Difference between revisions of "TSS:Hg 184199.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=L38696:0 BC105018:0 AK291079:11 AK291054:17 AK222915:-82 ENST00000333552.9:-95 | + | |all_trans=L38696:0 BC105018:0 AK291079:11 AK291054:17 AK222915:-82 ENST00000333552.9:-95 AF148457:-122 ENST00000246194.8:-137 NM_007367:-137 NM_016732:-137 AK299766:-137 BC103753:-143 ENST00000413297.5:-246 AK226085:-295 ENST00000448364.5:-368 ENST00000375114.7:-402 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=145 |
|end=33994064 | |end=33994064 | ||
|end_of_center_position=33994056 | |end_of_center_position=33994056 | ||
| − | |entrez_id= | + | |entrez_id=22913 |
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias= | + | |gene_alias=HNRPCL2{{!}}P542 |
| − | |gene_description=RALY | + | |gene_description=RALY heterogeneous nuclear ribonucleoprotein |
|gene_id=22913 | |gene_id=22913 | ||
|gene_name=RALY heterogeneous nuclear ribonucleoprotein | |gene_name=RALY heterogeneous nuclear ribonucleoprotein | ||
| Line 16: | Line 16: | ||
|gene_symbol=RALY | |gene_symbol=RALY | ||
|gene_synonyms=HNRPCL2 P542 | |gene_synonyms=HNRPCL2 P542 | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id=HGNC:15921 | |hgnc_mgi_id=HGNC:15921 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000125970 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_007367 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_007367 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.136947 |
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=33994047 | |start=33994047 | ||
Revision as of 00:34, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 33994055 |
|---|---|
| End of the center position in the TSS region: | 33994056 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | L38696 BC105018 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | L38696:0 BC105018:0 AK291079:11 AK291054:17 AK222915:-82 ENST00000333552.9:-95 AF148457:-122 ENST00000246194.8:-137 NM_007367:-137 NM_016732:-137 AK299766:-137 BC103753:-143 ENST00000413297.5:-246 AK226085:-295 ENST00000448364.5:-368 ENST00000375114.7:-402 |
TATA-Box annotation
| Distance to TSS: | 145 |
|---|---|
| Nearest PromoterID: | NM_007367 |
| Entrez ID: | 22913 |
| Nearest Unigene: | Hs.136947 |
| Nearest Refseq: | NM_007367 |
| Nearest Ensembl: | ENSG00000125970 |
| Gene Name: | RALY heterogeneous nuclear ribonucleoprotein |
| Gene Alias: | HNRPCL2|P542 |
| Gene Description: | RALY heterogeneous nuclear ribonucleoprotein |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
