Difference between revisions of "TSS:Mm 99377.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000010985.7:0 NM_029287 | + | |all_trans=ENSMUST00000010985.7:0 NM_029287:0 AK005669:0 BC116819:0 BC116821:0 BC100517:12 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 9: | Line 9: | ||
|entrez_id=75437 | |entrez_id=75437 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias= | + | |gene_alias=1700006E09Rik |
| − | |gene_description= | + | |gene_description=CFAP97 domain containing 1 |
|gene_id=75437 | |gene_id=75437 | ||
| − | |gene_name= | + | |gene_name=CFAP97 domain containing 1 |
|gene_source=MGI:1922687 | |gene_source=MGI:1922687 | ||
| − | |gene_symbol= | + | |gene_symbol=Cfap97d1 |
| − | |gene_synonyms= | + | |gene_synonyms=1700006E09Rik |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1922687 | |hgnc_mgi_id=MGI:1922687 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_029287 | |nearest_refseq=NM_029287 | ||
|nearest_unigene=Mm.108632 | |nearest_unigene=Mm.108632 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=mouse | |species=mouse | ||
|start=101987050 | |start=101987050 | ||
|start_of_center_position=101987059 | |start_of_center_position=101987059 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000010985.7 NM_029287 | + | |transcript_name=ENSMUST00000010985.7 NM_029287 AK005669 BC116819 BC116821 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99377.1 | |tss_id=mm_99377.1 | ||
Revision as of 03:50, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101987059 |
|---|---|
| End of the center position in the TSS region: | 101987060 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000010985.7 NM_029287 AK005669 BC116819 BC116821 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000010985.7:0 NM_029287:0 AK005669:0 BC116819:0 BC116821:0 BC100517:12 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_029287 |
| Entrez ID: | 75437 |
| Nearest Unigene: | Mm.108632 |
| Nearest Refseq: | NM_029287 |
| Nearest Ensembl: | ENSMUSG00000010841 |
| Gene Name: | CFAP97 domain containing 1 |
| Gene Alias: | 1700006E09Rik |
| Gene Description: | CFAP97 domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
