Difference between revisions of "TSS:Mm 99401.1"
From referenceTSS
| Line 5: | Line 5: | ||
|AW545836= | |AW545836= | ||
|UGRP= | |UGRP= | ||
| − | |all_trans=AK165395:0 AY186239:0 ENSMUST00000139995.1:-15 ENSMUST00000131382.7:-86 NM_175935 | + | |all_trans=AK165395:0 AY186239:0 ENSMUST00000139995.1:-15 ENSMUST00000131382.7:-86 NM_175935:-142 BC069959:-142 ENSMUST00000078975.7:-172 LF230832:-208 MA466409:-208 ENSMUST00000070334.9:-221 AK002966:-221 LF198914:-224 MA434491:-224 LF230834:375 MA466411:375 LF230835:451 MA466412:451 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 14: | Line 14: | ||
|entrez_id=68401 | |entrez_id=68401 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=0710001K01Rik | + | |gene_alias=0710001K01Rik{{!}}AU019276{{!}}AU045429{{!}}AV128920{{!}}AW545836{{!}}UGRP |
| − | |gene_description= | + | |gene_description=glucose 6 phosphatase, catalytic, 3 |
|gene_id=68401 | |gene_id=68401 | ||
| − | |gene_name= | + | |gene_name=glucose 6 phosphatase, catalytic, 3 |
|gene_source=MGI:1915651 | |gene_source=MGI:1915651 | ||
|gene_symbol=G6pc3 | |gene_symbol=G6pc3 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_175935 | |nearest_refseq=NM_175935 | ||
|nearest_unigene=Mm.22385 | |nearest_unigene=Mm.22385 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=mouse | |species=mouse | ||
|start=102189840 | |start=102189840 | ||
|start_of_center_position=102189855 | |start_of_center_position=102189855 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-40(GGCTAGAAAGGG,-,0.00) |
|transcript_name=AK165395 AY186239 | |transcript_name=AK165395 AY186239 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 03:50, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 102189855 |
|---|---|
| End of the center position in the TSS region: | 102189856 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK165395 AY186239 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | AK165395:0 AY186239:0 ENSMUST00000139995.1:-15 ENSMUST00000131382.7:-86 NM_175935:-142 BC069959:-142 ENSMUST00000078975.7:-172 LF230832:-208 MA466409:-208 ENSMUST00000070334.9:-221 AK002966:-221 LF198914:-224 MA434491:-224 LF230834:375 MA466411:375 LF230835:451 MA466412:451 |
TATA-Box annotation
| Distance to TSS: | 156 |
|---|---|
| Nearest PromoterID: | NM_175935 |
| Entrez ID: | 68401 |
| Nearest Unigene: | Mm.22385 |
| Nearest Refseq: | NM_175935 |
| Nearest Ensembl: | ENSMUSG00000034793 |
| Gene Name: | glucose 6 phosphatase, catalytic, 3 |
| Gene Alias: | 0710001K01Rik|AU019276|AU045429|AV128920|AW545836|UGRP |
| Gene Description: | glucose 6 phosphatase, catalytic, 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -40(GGCTAGAAAGGG,-,0.00) |
