Difference between revisions of "TSS:Hg 111884.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AF016507:-63 BC072020:-83 BC052276:-106 ENST00000494626.6 | + | |all_trans=AF016507:-63 BC072020:-83 BC052276:-106 ENST00000494626.6:-107 ENST00000337195.9:-121 AL833398:-121 BC002486:-122 NM_001290214:-171 NM_001329:-171 ENST00000460976.5:234 ENST00000467395.2:422 NM_001321012:422 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=-63 | |distance=-63 | ||
| − | |distance_to_tss= | + | |distance_to_tss=178 |
|end=125160392 | |end=125160392 | ||
|end_of_center_position=125160386 | |end_of_center_position=125160386 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:2495 | |hgnc_mgi_id=HGNC:2495 | ||
|nearest_ensembl=ENSG00000175029 | |nearest_ensembl=ENSG00000175029 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001329 |
|nearest_refseq=NM_001329 | |nearest_refseq=NM_001329 | ||
|nearest_unigene=Hs.501345 | |nearest_unigene=Hs.501345 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=125160378 | |start=125160378 | ||
Revision as of 20:43, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 125160385 |
|---|---|
| End of the center position in the TSS region: | 125160386 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF016507 |
|---|---|
| Distance: | -63 |
| Num_trans: | 12 |
| All_trans: | AF016507:-63 BC072020:-83 BC052276:-106 ENST00000494626.6:-107 ENST00000337195.9:-121 AL833398:-121 BC002486:-122 NM_001290214:-171 NM_001329:-171 ENST00000460976.5:234 ENST00000467395.2:422 NM_001321012:422 |
TATA-Box annotation
| Distance to TSS: | 178 |
|---|---|
| Nearest PromoterID: | NM_001329 |
| Entrez ID: | 1488 |
| Nearest Unigene: | Hs.501345 |
| Nearest Refseq: | NM_001329 |
| Nearest Ensembl: | ENSG00000175029 |
| Gene Name: | C-terminal binding protein 2 |
| Gene Alias: | - |
| Gene Description: | C-terminal binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
