Difference between revisions of "TSS:Mm 99496.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK006639:14 ENSMUST00000159834.1:-20 BC119102:-20 BC119104:-20 BC144894:-20 | + | |all_trans=AK006639:14 ENSMUST00000159834.1:-20 BC119102:-20 BC119104:-20 BC144894:-20 AK032002:-21 NM_001364757:-41 NM_028492:-41 ENSMUST00000021307.9:-61 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=14 | |distance=14 | ||
| − | |distance_to_tss= | + | |distance_to_tss=47 |
|end=102881278 | |end=102881278 | ||
|end_of_center_position=102881272 | |end_of_center_position=102881272 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:1920543 | |hgnc_mgi_id=MGI:1920543 | ||
|nearest_ensembl=ENSMUSG00000020930 | |nearest_ensembl=ENSMUSG00000020930 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001364757 |
|nearest_refseq=NM_028492 | |nearest_refseq=NM_028492 | ||
|nearest_unigene=Mm.67659 | |nearest_unigene=Mm.67659 | ||
Revision as of 03:52, 22 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 102881271 |
|---|---|
| End of the center position in the TSS region: | 102881272 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK006639 |
|---|---|
| Distance: | 14 |
| Num_trans: | 9 |
| All_trans: | AK006639:14 ENSMUST00000159834.1:-20 BC119102:-20 BC119104:-20 BC144894:-20 AK032002:-21 NM_001364757:-41 NM_028492:-41 ENSMUST00000021307.9:-61 |
TATA-Box annotation
| Distance to TSS: | 47 |
|---|---|
| Nearest PromoterID: | NM_001364757 |
| Entrez ID: | 73293 |
| Nearest Unigene: | Mm.67659 |
| Nearest Refseq: | NM_028492 |
| Nearest Ensembl: | ENSMUSG00000020930 |
| Gene Name: | coiled-coil domain containing 103 |
| Gene Alias: | 1700039D13Rik |
| Gene Description: | coiled-coil domain containing 103 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
