Difference between revisions of "TSS:Mm 99713.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000021049.8:19 ENSMUST00000133131.1:19 AK012294:19 BC030840:30 AK010505:31 AK135451:41 AK145703:46 NM_008950 | + | |all_trans=ENSMUST00000021049.8:19 ENSMUST00000133131.1:19 AK012294:19 KY499681:26 BC030840:30 AK010505:31 AK135451:41 AK145703:46 NM_008950:50 Z54219:50 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=19 | |distance=19 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-46 |
|end=106256135 | |end=106256135 | ||
|end_of_center_position=106256130 | |end_of_center_position=106256130 | ||
| − | |entrez_id= | + | |entrez_id=56095 |
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias= | + | |gene_alias=AA537063{{!}}AU045295{{!}}C79843{{!}}D11Ertd400e{{!}}Epcs3 |
| − | |gene_description= | + | |gene_description=FtsJ RNA methyltransferase homolog 3 (E. coli) |
|gene_id=19184 | |gene_id=19184 | ||
| − | |gene_name= | + | |gene_name=protease (prosome, macropain) 26S subunit, ATPase 5 |
|gene_source=MGI:105047 | |gene_source=MGI:105047 | ||
|gene_symbol=Psmc5 | |gene_symbol=Psmc5 | ||
| − | |gene_synonyms=mSUG1 | + | |gene_synonyms=Rpt6 mSUG1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:105047 | |hgnc_mgi_id=MGI:105047 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSMUSG00000020706 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_025310 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_025310 |
| − | |nearest_unigene=Mm. | + | |nearest_unigene=Mm.29795 |
|num_trans=10 | |num_trans=10 | ||
|species=mouse | |species=mouse | ||
Revision as of 03:57, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 106256129 |
|---|---|
| End of the center position in the TSS region: | 106256130 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000021049.8 ENSMUST00000133131.1 AK012294 |
|---|---|
| Distance: | 19 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000021049.8:19 ENSMUST00000133131.1:19 AK012294:19 KY499681:26 BC030840:30 AK010505:31 AK135451:41 AK145703:46 NM_008950:50 Z54219:50 |
TATA-Box annotation
| Distance to TSS: | -46 |
|---|---|
| Nearest PromoterID: | NM_025310 |
| Entrez ID: | 56095 |
| Nearest Unigene: | Mm.29795 |
| Nearest Refseq: | NM_025310 |
| Nearest Ensembl: | ENSMUSG00000020706 |
| Gene Name: | protease (prosome, macropain) 26S subunit, ATPase 5 |
| Gene Alias: | AA537063|AU045295|C79843|D11Ertd400e|Epcs3 |
| Gene Description: | FtsJ RNA methyltransferase homolog 3 (E. coli) |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
