Difference between revisions of "TSS:Mm 99718.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|AI429105= | |AI429105= | ||
| − | |all_trans=ENSMUST00000142472.7:-20 NM_029467:-20 | + | |all_trans=ENSMUST00000142472.7:-20 NM_029467:-20 NM_001379686:20 AK076581:-20 AK016263:20 ENSMUST00000044462.3:46 BC050746:46 AK162061:-152 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 10: | Line 10: | ||
|entrez_id=75870 | |entrez_id=75870 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=4930570F09Rik | + | |gene_alias=4930570F09Rik{{!}}AI429105 |
|gene_description=testicular cell adhesion molecule 1 | |gene_description=testicular cell adhesion molecule 1 | ||
|gene_id=75870 | |gene_id=75870 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_029467 | |nearest_refseq=NM_029467 | ||
|nearest_unigene=Mm.159608 | |nearest_unigene=Mm.159608 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=106276691 | |start=106276691 | ||
|start_of_center_position=106276696 | |start_of_center_position=106276696 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000142472.7 NM_029467 | + | |transcript_name=ENSMUST00000142472.7 NM_029467 AK076581 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99718.1 | |tss_id=mm_99718.1 | ||
Revision as of 03:57, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 106276696 |
|---|---|
| End of the center position in the TSS region: | 106276697 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000142472.7 NM_029467 AK076581 |
|---|---|
| Distance: | -20 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000142472.7:-20 NM_029467:-20 NM_001379686:20 AK076581:-20 AK016263:20 ENSMUST00000044462.3:46 BC050746:46 AK162061:-152 |
TATA-Box annotation
| Distance to TSS: | 25 |
|---|---|
| Nearest PromoterID: | NM_029467 |
| Entrez ID: | 75870 |
| Nearest Unigene: | Mm.159608 |
| Nearest Refseq: | NM_029467 |
| Nearest Ensembl: | ENSMUSG00000020712 |
| Gene Name: | testicular cell adhesion molecule 1 |
| Gene Alias: | 4930570F09Rik|AI429105 |
| Gene Description: | testicular cell adhesion molecule 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
