Difference between revisions of "TSS:Hg 187358.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000535573 | + | |all_trans=ENST00000535573.1:101 ENST00000536076.1:220 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 15: | Line 15: | ||
|gene_source=HGNC:186 | |gene_source=HGNC:186 | ||
|gene_symbol=ADA | |gene_symbol=ADA | ||
| − | |gene_synonyms= | + | |gene_synonyms=ADA1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:186 | |hgnc_mgi_id=HGNC:186 | ||
|nearest_ensembl=ENSG00000196839 | |nearest_ensembl=ENSG00000196839 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001322050 |
|nearest_refseq=NM_000022 | |nearest_refseq=NM_000022 | ||
|nearest_unigene=Hs.654536 | |nearest_unigene=Hs.654536 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=44652333 | |start=44652333 | ||
|start_of_center_position=44652348 | |start_of_center_position=44652348 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=42(GTTTCTTAAAGG,-,0.00) |
| − | |transcript_name=ENST00000535573 | + | |transcript_name=ENST00000535573.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_187358.1 | |tss_id=hg_187358.1 | ||
Revision as of 01:48, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 44652348 |
|---|---|
| End of the center position in the TSS region: | 44652349 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000535573.1 |
|---|---|
| Distance: | 101 |
| Num_trans: | 2 |
| All_trans: | ENST00000535573.1:101 ENST00000536076.1:220 |
TATA-Box annotation
| Distance to TSS: | -590 |
|---|---|
| Nearest PromoterID: | NM_001322050 |
| Entrez ID: | 100 |
| Nearest Unigene: | Hs.654536 |
| Nearest Refseq: | NM_000022 |
| Nearest Ensembl: | ENSG00000196839 |
| Gene Name: | adenosine deaminase |
| Gene Alias: | - |
| Gene Description: | adenosine deaminase |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 42(GTTTCTTAAAGG,-,0.00) |
