Difference between revisions of "TSS:Hg 224568.1"
From referenceTSS
| Line 6: | Line 6: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-656 |
|end=809339 | |end=809339 | ||
|end_of_center_position=809312 | |end_of_center_position=809312 | ||
|entrez_id=6181 | |entrez_id=6181 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=D11S2243E | + | |gene_alias=D11S2243E{{!}}LP2{{!}}P2{{!}}RPP2 |
|gene_description=ribosomal protein lateral stalk subunit P2 | |gene_description=ribosomal protein lateral stalk subunit P2 | ||
|gene_id=6181 | |gene_id=6181 | ||
| − | |gene_name= | + | |gene_name=RPLP2 |
|gene_source=HGNC:10377 | |gene_source=HGNC:10377 | ||
|gene_symbol=RPLP2 | |gene_symbol=RPLP2 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_001004 | |nearest_refseq=NM_001004 | ||
|nearest_unigene=Hs.437594 | |nearest_unigene=Hs.437594 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=809283 | |start=809283 | ||
|start_of_center_position=809311 | |start_of_center_position=809311 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_224568.1 | |tss_id=hg_224568.1 | ||
Latest revision as of 09:23, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 809311 |
|---|---|
| End of the center position in the TSS region: | 809312 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000321153.8:308 uc001lrq.2:308 |
TATA-Box annotation
| Distance to TSS: | -656 |
|---|---|
| Nearest PromoterID: | NM_001004 |
| Entrez ID: | 6181 |
| Nearest Unigene: | Hs.437594 |
| Nearest Refseq: | NM_001004 |
| Nearest Ensembl: | ENSG00000177600 |
| Gene Name: | RPLP2 |
| Gene Alias: | D11S2243E|LP2|P2|RPP2 |
| Gene Description: | ribosomal protein lateral stalk subunit P2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
