Difference between revisions of "TSS:Hg 112267.1"
From referenceTSS
| Line 3: | Line 3: | ||
|P2= | |P2= | ||
|RPP2= | |RPP2= | ||
| − | |all_trans=ENST00000530398 | + | |all_trans=ENST00000530398.1:0 KJ892048:0 CR542248:0 CR542212:0 ENST00000526222.5:117 ENST00000524867.1:-219 AK056066:-225 BC007573:-231 BC062314:-235 ENST00000530797.5:-238 AK311954:-254 AK130959:-254 M17887:-254 ENST00000321153.9:-255 NM_001004:-255 D28411:-255 BC005920:-255 ENST00000532004.5:-257 BC005354:-257 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=284 |
|end=810281 | |end=810281 | ||
|end_of_center_position=810252 | |end_of_center_position=810252 | ||
|entrez_id=6181 | |entrez_id=6181 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=D11S2243E | + | |gene_alias=D11S2243E{{!}}LP2{{!}}P2{{!}}RPP2 |
|gene_description=ribosomal protein lateral stalk subunit P2 | |gene_description=ribosomal protein lateral stalk subunit P2 | ||
|gene_id=6181 | |gene_id=6181 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_001004 | |nearest_refseq=NM_001004 | ||
|nearest_unigene=Hs.437594 | |nearest_unigene=Hs.437594 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=810221 | |start=810221 | ||
|start_of_center_position=810251 | |start_of_center_position=810251 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000530398 | + | |transcript_name=ENST00000530398.1 KJ892048 CR542248 CR542212 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_112267.1 | |tss_id=hg_112267.1 | ||
Revision as of 20:52, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 810251 |
|---|---|
| End of the center position in the TSS region: | 810252 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000530398.1 KJ892048 CR542248 CR542212 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000530398.1:0 KJ892048:0 CR542248:0 CR542212:0 ENST00000526222.5:117 ENST00000524867.1:-219 AK056066:-225 BC007573:-231 BC062314:-235 ENST00000530797.5:-238 AK311954:-254 AK130959:-254 M17887:-254 ENST00000321153.9:-255 NM_001004:-255 D28411:-255 BC005920:-255 ENST00000532004.5:-257 BC005354:-257 |
TATA-Box annotation
| Distance to TSS: | 284 |
|---|---|
| Nearest PromoterID: | NM_001004 |
| Entrez ID: | 6181 |
| Nearest Unigene: | Hs.437594 |
| Nearest Refseq: | NM_001004 |
| Nearest Ensembl: | ENSG00000177600 |
| Gene Name: | ribosomal protein lateral stalk subunit P2 |
| Gene Alias: | D11S2243E|LP2|P2|RPP2 |
| Gene Description: | ribosomal protein lateral stalk subunit P2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
