Difference between revisions of "TSS:Hg 117878.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=U97698:-145 AK092533:-193 AK098503:-405 ENST00000532016 | + | |all_trans=U97698:-145 AK092533:-193 AK098503:-405 ENST00000532016.1:427 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=-145 | |distance=-145 | ||
| − | |distance_to_tss= | + | |distance_to_tss=20132 |
|end=1016592 | |end=1016592 | ||
|end_of_center_position=1016586 | |end_of_center_position=1016586 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=MUC-6 | |gene_alias=MUC-6 | ||
| − | |gene_description= | + | |gene_description=mucin 6, oligomeric mucus/gel-forming |
|gene_id=4588 | |gene_id=4588 | ||
| − | |gene_name= | + | |gene_name=mucin 6, oligomeric mucus/gel-forming |
|gene_source=HGNC:7517 | |gene_source=HGNC:7517 | ||
|gene_symbol=MUC6 | |gene_symbol=MUC6 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_005961 | |nearest_refseq=NM_005961 | ||
|nearest_unigene=Hs.528432 | |nearest_unigene=Hs.528432 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=1016579 | |start=1016579 | ||
Revision as of 23:02, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1016585 |
|---|---|
| End of the center position in the TSS region: | 1016586 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | U97698 |
|---|---|
| Distance: | -145 |
| Num_trans: | 4 |
| All_trans: | U97698:-145 AK092533:-193 AK098503:-405 ENST00000532016.1:427 |
TATA-Box annotation
| Distance to TSS: | 20132 |
|---|---|
| Nearest PromoterID: | NM_005961 |
| Entrez ID: | 4588 |
| Nearest Unigene: | Hs.528432 |
| Nearest Refseq: | NM_005961 |
| Nearest Ensembl: | ENSG00000184956 |
| Gene Name: | mucin 6, oligomeric mucus/gel-forming |
| Gene Alias: | MUC-6 |
| Gene Description: | mucin 6, oligomeric mucus/gel-forming |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
