Difference between revisions of "TSS:Hg 187459.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000409554.1:28 | + | |all_trans=ENST00000409554.1:28 ENST00000651288.1:118 ENST00000504988.1:354 AK311906:356 ENST00000354280.9:379 NM_001198986:379 NM_020398:379 NM_001302861:379 AK301937:379 BC003675:379 GQ891395:391 BC044829:391 BC053369:396 AL118493:400 AF286370:402 AF286368:402 CU690968:422 HQ448506:422 KJ894392:422 ENST00000496898.1:423 AK126022:423 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=28 | |distance=28 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-382 |
|end=45547786 | |end=45547786 | ||
|end_of_center_position=45547783 | |end_of_center_position=45547783 | ||
| − | |entrez_id= | + | |entrez_id=57119 |
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=SPINLW1 | + | |gene_alias=CT71{{!}}CT72{{!}}SPINLW1{{!}}WAP7{{!}}WFDC7{{!}}dJ461P17.2 |
| − | |gene_description= | + | |gene_description=epididymal peptidase inhibitor |
|gene_id=57119 | |gene_id=57119 | ||
|gene_name=epididymal peptidase inhibitor | |gene_name=epididymal peptidase inhibitor | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:15932 | |hgnc_mgi_id=HGNC:15932 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000101448 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_020398 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_020398 |
|nearest_unigene=Hs.121084 | |nearest_unigene=Hs.121084 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=45547779 | |start=45547779 | ||
|start_of_center_position=45547782 | |start_of_center_position=45547782 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000409554 | + | |transcript_name=ENST00000409554.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_187459.1 | |tss_id=hg_187459.1 | ||
Revision as of 01:50, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45547782 |
|---|---|
| End of the center position in the TSS region: | 45547783 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000409554.1 |
|---|---|
| Distance: | 28 |
| Num_trans: | 21 |
| All_trans: | ENST00000409554.1:28 ENST00000651288.1:118 ENST00000504988.1:354 AK311906:356 ENST00000354280.9:379 NM_001198986:379 NM_020398:379 NM_001302861:379 AK301937:379 BC003675:379 GQ891395:391 BC044829:391 BC053369:396 AL118493:400 AF286370:402 AF286368:402 CU690968:422 HQ448506:422 KJ894392:422 ENST00000496898.1:423 AK126022:423 |
TATA-Box annotation
| Distance to TSS: | -382 |
|---|---|
| Nearest PromoterID: | NM_020398 |
| Entrez ID: | 57119 |
| Nearest Unigene: | Hs.121084 |
| Nearest Refseq: | NM_020398 |
| Nearest Ensembl: | ENSG00000101448 |
| Gene Name: | epididymal peptidase inhibitor |
| Gene Alias: | CT71|CT72|SPINLW1|WAP7|WFDC7|dJ461P17.2 |
| Gene Description: | epididymal peptidase inhibitor |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
