Difference between revisions of "TSS:Hg 187480.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000471401.5:0 | + | |all_trans=ENST00000471401.5:0 ENST00000243938.9:0 ENST00000490877.1:0 NM_080614:0 ENST00000465935.1:1 ENST00000493693.5:-9 BC026014:-9 ENST00000462017.5:-12 ENST00000487343.5:-12 BC102013:-12 BC102014:-12 AF488306:-17 ENST00000467679.5:-24 ENST00000481847.5:-41 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|dJ447F3.3= | |dJ447F3.3= | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=3 |
|end=45791891 | |end=45791891 | ||
|end_of_center_position=45791880 | |end_of_center_position=45791880 | ||
|entrez_id=140686 | |entrez_id=140686 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=WAP14 | + | |gene_alias=WAP14{{!}}dJ447F3.3 |
|gene_description=WAP four-disulfide core domain 3 | |gene_description=WAP four-disulfide core domain 3 | ||
|gene_id=140686 | |gene_id=140686 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_080614 | |nearest_refseq=NM_080614 | ||
|nearest_unigene=Hs.419126 | |nearest_unigene=Hs.419126 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=45791868 | |start=45791868 | ||
|start_of_center_position=45791879 | |start_of_center_position=45791879 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000471401.5 ENST00000490877.1 | + | |transcript_name=ENST00000471401.5 ENST00000243938.9 ENST00000490877.1 NM_080614 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_187480.1 | |tss_id=hg_187480.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8IUB2 |
}} | }} | ||
Revision as of 01:51, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 45791879 |
|---|---|
| End of the center position in the TSS region: | 45791880 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000471401.5 ENST00000243938.9 ENST00000490877.1 NM_080614 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000471401.5:0 ENST00000243938.9:0 ENST00000490877.1:0 NM_080614:0 ENST00000465935.1:1 ENST00000493693.5:-9 BC026014:-9 ENST00000462017.5:-12 ENST00000487343.5:-12 BC102013:-12 BC102014:-12 AF488306:-17 ENST00000467679.5:-24 ENST00000481847.5:-41 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_080614 |
| Entrez ID: | 140686 |
| Nearest Unigene: | Hs.419126 |
| Nearest Refseq: | NM_080614 |
| Nearest Ensembl: | ENSG00000124116 |
| Gene Name: | WAP four-disulfide core domain 3 |
| Gene Alias: | WAP14|dJ447F3.3 |
| Gene Description: | WAP four-disulfide core domain 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
