Difference between revisions of "TSS:Mm 100204.1"
From referenceTSS
| Line 2: | Line 2: | ||
|1500035B17Rik= | |1500035B17Rik= | ||
|4933424L15Rik= | |4933424L15Rik= | ||
| − | |all_trans=ENSMUST00000176799.7:0 ENSMUST00000132593.7:0 ENSMUST00000140869.1:0 AK003450:0 AK160133:0 BC026936:-52 ENSMUST00000176765.1:-67 ENSMUST00000128784.1:-91 AK168267:-91 ENSMUST00000175930.7:-97 AK016897:-97 AK135294:-97 NM_028865 | + | |all_trans=ENSMUST00000176799.7:0 ENSMUST00000132593.7:0 ENSMUST00000140869.1:0 AK003450:0 AK160133:0 BC026936:-52 ENSMUST00000176765.1:-67 ENSMUST00000128784.1:-91 AK168267:-91 ENSMUST00000175930.7:-97 AK016897:-97 AK135294:-97 NM_028865:-137 ENSMUST00000106370.9:-374 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 11: | Line 11: | ||
|entrez_id=74319 | |entrez_id=74319 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=1110005A03Rik | + | |gene_alias=1110005A03Rik{{!}}1500035B17Rik{{!}}4933424L15Rik |
|gene_description=methyltransferase like 23 | |gene_description=methyltransferase like 23 | ||
|gene_id=74319 | |gene_id=74319 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_028865 | |nearest_refseq=NM_028865 | ||
|nearest_unigene=Mm.429312 | |nearest_unigene=Mm.429312 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=mouse | |species=mouse | ||
|start=116843651 | |start=116843651 | ||
Revision as of 16:11, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116843664 |
|---|---|
| End of the center position in the TSS region: | 116843665 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000176799.7 ENSMUST00000132593.7 ENSMUST00000140869.1 AK003450 AK160133 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENSMUST00000176799.7:0 ENSMUST00000132593.7:0 ENSMUST00000140869.1:0 AK003450:0 AK160133:0 BC026936:-52 ENSMUST00000176765.1:-67 ENSMUST00000128784.1:-91 AK168267:-91 ENSMUST00000175930.7:-97 AK016897:-97 AK135294:-97 NM_028865:-137 ENSMUST00000106370.9:-374 |
TATA-Box annotation
| Distance to TSS: | 149 |
|---|---|
| Nearest PromoterID: | NM_028865 |
| Entrez ID: | 74319 |
| Nearest Unigene: | Mm.429312 |
| Nearest Refseq: | NM_028865 |
| Nearest Ensembl: | ENSMUSG00000090266 |
| Gene Name: | methyltransferase like 23 |
| Gene Alias: | 1110005A03Rik|1500035B17Rik|4933424L15Rik |
| Gene Description: | methyltransferase like 23 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
