Difference between revisions of "TSS:Hg 118263.1"
From referenceTSS
| Line 2: | Line 2: | ||
|NAP2= | |NAP2= | ||
|NAP2L= | |NAP2L= | ||
| − | |all_trans=ENST00000430811.5:0 | + | |all_trans=ENST00000430811.5:0 NM_001369378:0 NM_001369384:0 ENST00000529361.5:-132 ENST00000528968.5:-132 ENST00000534372.1:-132 ENST00000531291.5:-133 ENST00000526842.5:-136 BC022090:-161 ENST00000448187.5:-162 AK316548:-165 AK316242:-165 ENST00000532325.6:-174 ENST00000399614.6:-174 AK299515:-174 AK316324:-195 ENST00000380542.9:-203 NM_005969:-203 NM_001369377:-203 NM_001369376:-203 NM_001369375:-203 NM_001369383:-203 NM_001369380:-203 NM_001369381:-203 NM_001369382:-203 ENST00000620138.4:-251 ENST00000526115.5:-251 U77456:-251 AK312599:-258 NM_001369386:296 NM_001369385:296 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=2992126 | |end=2992126 | ||
|end_of_center_position=2992107 | |end_of_center_position=2992107 | ||
|entrez_id=4676 | |entrez_id=4676 | ||
|gc_percent=0.850746 | |gc_percent=0.850746 | ||
| − | |gene_alias=NAP1L4b | + | |gene_alias=NAP1L4b{{!}}NAP2{{!}}NAP2L{{!}}hNAP2 |
|gene_description=nucleosome assembly protein 1 like 4 | |gene_description=nucleosome assembly protein 1 like 4 | ||
|gene_id=4676 | |gene_id=4676 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:7640 | |hgnc_mgi_id=HGNC:7640 | ||
|nearest_ensembl=ENSG00000205531 | |nearest_ensembl=ENSG00000205531 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001369384 |
|nearest_refseq=NM_005969 | |nearest_refseq=NM_005969 | ||
|nearest_unigene=Hs.731784 | |nearest_unigene=Hs.731784 | ||
| − | |num_trans= | + | |num_trans=31 |
|species=human | |species=human | ||
|start=2992086 | |start=2992086 | ||
|start_of_center_position=2992106 | |start_of_center_position=2992106 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000430811.5 | + | |transcript_name=ENST00000430811.5 NM_001369378 NM_001369384 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_118263.1 | |tss_id=hg_118263.1 | ||
Revision as of 23:11, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 2992106 |
|---|---|
| End of the center position in the TSS region: | 2992107 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000430811.5 NM_001369378 NM_001369384 |
|---|---|
| Distance: | 0 |
| Num_trans: | 31 |
| All_trans: | ENST00000430811.5:0 NM_001369378:0 NM_001369384:0 ENST00000529361.5:-132 ENST00000528968.5:-132 ENST00000534372.1:-132 ENST00000531291.5:-133 ENST00000526842.5:-136 BC022090:-161 ENST00000448187.5:-162 AK316548:-165 AK316242:-165 ENST00000532325.6:-174 ENST00000399614.6:-174 AK299515:-174 AK316324:-195 ENST00000380542.9:-203 NM_005969:-203 NM_001369377:-203 NM_001369376:-203 NM_001369375:-203 NM_001369383:-203 NM_001369380:-203 NM_001369381:-203 NM_001369382:-203 ENST00000620138.4:-251 ENST00000526115.5:-251 U77456:-251 AK312599:-258 NM_001369386:296 NM_001369385:296 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001369384 |
| Entrez ID: | 4676 |
| Nearest Unigene: | Hs.731784 |
| Nearest Refseq: | NM_005969 |
| Nearest Ensembl: | ENSG00000205531 |
| Gene Name: | nucleosome assembly protein 1 like 4 |
| Gene Alias: | NAP1L4b|NAP2|NAP2L|hNAP2 |
| Gene Description: | nucleosome assembly protein 1 like 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.850746 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
