Difference between revisions of "TSS:Hg 118267.1"
From referenceTSS
| Line 2: | Line 2: | ||
|NAP2= | |NAP2= | ||
|NAP2L= | |NAP2L= | ||
| − | |all_trans=ENST00000620138.4 | + | |all_trans=ENST00000620138.4:0 ENST00000526115.5:0 U77456:0 AK312599:0 ENST00000380542.9:45 NM_005969:45 NM_001369377:45 NM_001369376:45 NM_001369375:45 NM_001369383:45 NM_001369380:45 NM_001369381:45 NM_001369382:45 AK316324:53 ENST00000532325.6:74 ENST00000399614.6:74 AK299515:74 AK316548:83 AK316242:83 ENST00000448187.5:86 BC022090:87 ENST00000526842.5:112 ENST00000531291.5:115 ENST00000529361.5:116 ENST00000528968.5:116 ENST00000534372.1:116 NM_001369378:267 NM_001369384:267 ENST00000430811.5:272 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-53 |
|end=2992391 | |end=2992391 | ||
|end_of_center_position=2992383 | |end_of_center_position=2992383 | ||
|entrez_id=4676 | |entrez_id=4676 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=NAP1L4b | + | |gene_alias=NAP1L4b{{!}}NAP2{{!}}NAP2L{{!}}hNAP2 |
|gene_description=nucleosome assembly protein 1 like 4 | |gene_description=nucleosome assembly protein 1 like 4 | ||
|gene_id=4676 | |gene_id=4676 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_005969 | |nearest_refseq=NM_005969 | ||
|nearest_unigene=Hs.731784 | |nearest_unigene=Hs.731784 | ||
| − | |num_trans= | + | |num_trans=29 |
|species=human | |species=human | ||
|start=2992373 | |start=2992373 | ||
|start_of_center_position=2992382 | |start_of_center_position=2992382 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000620138.4 | + | |transcript_name=ENST00000620138.4 ENST00000526115.5 U77456 AK312599 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_118267.1 | |tss_id=hg_118267.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q99733 |
}} | }} | ||
Revision as of 23:11, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 2992382 |
|---|---|
| End of the center position in the TSS region: | 2992383 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000620138.4 ENST00000526115.5 U77456 AK312599 |
|---|---|
| Distance: | 0 |
| Num_trans: | 29 |
| All_trans: | ENST00000620138.4:0 ENST00000526115.5:0 U77456:0 AK312599:0 ENST00000380542.9:45 NM_005969:45 NM_001369377:45 NM_001369376:45 NM_001369375:45 NM_001369383:45 NM_001369380:45 NM_001369381:45 NM_001369382:45 AK316324:53 ENST00000532325.6:74 ENST00000399614.6:74 AK299515:74 AK316548:83 AK316242:83 ENST00000448187.5:86 BC022090:87 ENST00000526842.5:112 ENST00000531291.5:115 ENST00000529361.5:116 ENST00000528968.5:116 ENST00000534372.1:116 NM_001369378:267 NM_001369384:267 ENST00000430811.5:272 |
TATA-Box annotation
| Distance to TSS: | -53 |
|---|---|
| Nearest PromoterID: | NM_005969 |
| Entrez ID: | 4676 |
| Nearest Unigene: | Hs.731784 |
| Nearest Refseq: | NM_005969 |
| Nearest Ensembl: | ENSG00000205531 |
| Gene Name: | nucleosome assembly protein 1 like 4 |
| Gene Alias: | NAP1L4b|NAP2|NAP2L|hNAP2 |
| Gene Description: | nucleosome assembly protein 1 like 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
