Difference between revisions of "TSS:Hg 112904.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC021714:0 | + | |all_trans=BC021714:0 ENST00000528947.5:-46 ENST00000299492.9:167 NR_147792:167 NM_003621:167 NM_001351862:167 NM_001351856:167 NM_001351854:167 NM_001351853:167 NM_001351855:167 AK308398:167 AK001131:167 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:9250 | |hgnc_mgi_id=HGNC:9250 | ||
|nearest_ensembl=ENSG00000166387 | |nearest_ensembl=ENSG00000166387 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351856 |
|nearest_refseq=NM_003621 | |nearest_refseq=NM_003621 | ||
|nearest_unigene=Hs.655714 | |nearest_unigene=Hs.655714 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=7513813 | |start=7513813 | ||
Revision as of 21:07, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 7513822 |
|---|---|
| End of the center position in the TSS region: | 7513823 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC021714 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | BC021714:0 ENST00000528947.5:-46 ENST00000299492.9:167 NR_147792:167 NM_003621:167 NM_001351862:167 NM_001351856:167 NM_001351854:167 NM_001351853:167 NM_001351855:167 AK308398:167 AK001131:167 |
TATA-Box annotation
| Distance to TSS: | 58 |
|---|---|
| Nearest PromoterID: | NM_001351856 |
| Entrez ID: | 8495 |
| Nearest Unigene: | Hs.655714 |
| Nearest Refseq: | NM_003621 |
| Nearest Ensembl: | ENSG00000166387 |
| Gene Name: | PPFIA binding protein 2 |
| Gene Alias: | Cclp1 |
| Gene Description: | PPFIA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
