Difference between revisions of "TSS:Hg 112913.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000533792.5 | + | |all_trans=ENST00000533792.5:-114 CR749258:-114 ENST00000532926.5:241 AK097449:241 ENST00000650027.1:498 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=-114 | |distance=-114 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-243 |
|end=7576526 | |end=7576526 | ||
|end_of_center_position=7576524 | |end_of_center_position=7576524 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:9250 | |hgnc_mgi_id=HGNC:9250 | ||
|nearest_ensembl=ENSG00000166387 | |nearest_ensembl=ENSG00000166387 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351858 |
|nearest_refseq=NM_003621 | |nearest_refseq=NM_003621 | ||
|nearest_unigene=Hs.655714 | |nearest_unigene=Hs.655714 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=7576521 | |start=7576521 | ||
|start_of_center_position=7576523 | |start_of_center_position=7576523 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000533792.5 | + | |transcript_name=ENST00000533792.5 CR749258 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_112913.1 | |tss_id=hg_112913.1 | ||
Revision as of 21:07, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 7576523 |
|---|---|
| End of the center position in the TSS region: | 7576524 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000533792.5 CR749258 |
|---|---|
| Distance: | -114 |
| Num_trans: | 5 |
| All_trans: | ENST00000533792.5:-114 CR749258:-114 ENST00000532926.5:241 AK097449:241 ENST00000650027.1:498 |
TATA-Box annotation
| Distance to TSS: | -243 |
|---|---|
| Nearest PromoterID: | NM_001351858 |
| Entrez ID: | 8495 |
| Nearest Unigene: | Hs.655714 |
| Nearest Refseq: | NM_003621 |
| Nearest Ensembl: | ENSG00000166387 |
| Gene Name: | PPFIA binding protein 2 |
| Gene Alias: | Cclp1 |
| Gene Description: | PPFIA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
