Difference between revisions of "TSS:Hg 118471.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000436351.2:0 | + | |all_trans=ENST00000436351.2:0 LF207839:-106 MA443416:-106 AF169802:243 ENST00000299498.11:244 NR_126508:244 NM_016229:244 ENST00000524790.5:272 BC001346:272 ENST00000526084.1:289 AB209000:289 AK308543:-401 ENST00000533558.5:-433 AK290102:-433 ENST00000525307.1:-436 ENST00000527542.5:-443 ENST00000531096.5:-468 NM_001302826:-492 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-259 |
|end=7673775 | |end=7673775 | ||
|end_of_center_position=7673760 | |end_of_center_position=7673760 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:24376 | |hgnc_mgi_id=HGNC:24376 | ||
|nearest_ensembl=ENSG00000166394 | |nearest_ensembl=ENSG00000166394 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_016229 |
|nearest_refseq=NM_016229 | |nearest_refseq=NM_016229 | ||
|nearest_unigene=Hs.414362 | |nearest_unigene=Hs.414362 | ||
| − | |num_trans= | + | |num_trans=18 |
|species=human | |species=human | ||
|start=7673743 | |start=7673743 | ||
|start_of_center_position=7673759 | |start_of_center_position=7673759 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=59(GTGTATTTATGG,-,0.00) |
| − | |transcript_name=ENST00000436351.2 | + | |transcript_name=ENST00000436351.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_118471.1 | |tss_id=hg_118471.1 | ||
Revision as of 23:16, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 7673759 |
|---|---|
| End of the center position in the TSS region: | 7673760 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000436351.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000436351.2:0 LF207839:-106 MA443416:-106 AF169802:243 ENST00000299498.11:244 NR_126508:244 NM_016229:244 ENST00000524790.5:272 BC001346:272 ENST00000526084.1:289 AB209000:289 AK308543:-401 ENST00000533558.5:-433 AK290102:-433 ENST00000525307.1:-436 ENST00000527542.5:-443 ENST00000531096.5:-468 NM_001302826:-492 |
TATA-Box annotation
| Distance to TSS: | -259 |
|---|---|
| Nearest PromoterID: | NM_016229 |
| Entrez ID: | 51700 |
| Nearest Unigene: | Hs.414362 |
| Nearest Refseq: | NM_016229 |
| Nearest Ensembl: | ENSG00000166394 |
| Gene Name: | cytochrome b5 reductase 2 |
| Gene Alias: | B5R.2 |
| Gene Description: | cytochrome b5 reductase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 59(GTGTATTTATGG,-,0.00) |
